Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0671 ATGAAGGCTACTGATAACTTCGGCAAAAGCAATATTATTGGGACTGGAAGATCAGGAACTGCTTACAAAGCTGTCCTTCATGATGGCACATCAGTCATGGTTAAGAGATTGCAGGAATCTCAACATTCAGAGAAAGAATTTCCATCTGAGATGAATATACTAGGGTCTGTCAAACATTGTAACTTGGTTTCACTTTTAGGTTTTTGCGTGGCTAAAAAGGAGAGGTTTTTGGTTTATAAAAATATGCCAAATGGTACCCTCCATGGTCAACTACACCCTGCTGCTGGTGCATGCACCATGGATTGGCCTCTAAGGCTCAAAATTGCAATTGGAGAAGCCAAGGGATTAGCATGGCTGAATCATAGTAGCAATCCTCGCATTATCCACCAAAACATAAGCTCTAAGTGCATCTTGTTGGATGCTGATTTTGAGCCCAAATTTTTTTATTTTGGTCTTGCTAGATTGATGAATCCAATTGATACACATTTGAGTACTTTTGTGAATGGGGAGTTTAGGGATTTAGGTTATGTTGTTCCTGAATATACAAAAACTTTGGTGGCTACTCCTAAAGGGGATATTTATAGCTTCGGGACCGTGCTTTTCGAGTTGGTGACAGGTGAAAGATCTACCCATGTGTCTAAAGCTCCAAAAACTTTTAAAGGAAATTTGGTAGAATGGATTCAACAGCAATCTAGCAATGCAAAACTCCATGAAGCCATTGATGAATCACTAGTTGGGTAG 741 0.3968 MKATDNFGKSNIIGTGRSGTAYKAVLHDGTSVMVKRLQESQHSEKEFPSEMNILGSVKHCNLVSLLGFCVAKKERFLVYKNMPNGTLHGQLHPAAGACTMDWPLRLKIAIGEAKGLAWLNHSSNPRIIHQNISSKCILLDADFEPKFFYFGLARLMNPIDTHLSTFVNGEFRDLGYVVPEYTKTLVATPKGDIYSFGTVLFELVTGERSTHVSKAPKTFKGNLVEWIQQQSSNAKLHEAIDESLVG* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0671 246 PANTHER LRR RECEPTOR-LIKE KINASE 1 245 - -
Gso9g0671 246 Pfam Protein tyrosine and serine/threonine kinase 11 212 IPR001245 GO:0004672|GO:0006468
Gso9g0671 246 PANTHER RECEPTOR-LIKE PROTEIN 55 1 245 - -
Gso9g0671 246 Gene3D Transferase(Phosphotransferase) domain 1 82 246 - -
Gso9g0671 246 PIRSF ILK 2 223 - -
Gso9g0671 246 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Gso9g0671 246 SUPERFAMILY Protein kinase-like (PK-like) 2 226 IPR011009 -
Gso9g0671 246 ProSiteProfiles Protein kinase domain profile. 7 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0671 Gso-Chr9 8994794 8995543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0671 1 244 Receptor kinase-like Gene Family AT1G27190 50.000 1.06e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gso9g0671 PK_Tyr_Ser-Thr 3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0671 - - gmx:100816197 502.286