Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0667 ATGGTGATTTTAAACCTTGGGAGAAAGGAGGAGCAGGGAGTGCGACTTGGGAAATACGAGTTGGGAAAGACACTTGGAGAAGGCAATTTTGGAAAAGTCAAGTTGGCAAGGGACACTCATTCTGGCAAACTATTTGCTGTTAAGATCCTTGACAAGAGCAAGATCATTGACCTCAATAACATTGATCAGATAAAGAGGGAAATATCGACCTTGAAGCTCCTAAAGCATCCGAACGTGGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAAAATTTATATGGTACTTGAGTACGTGAATGGAGGAGAATTATTTGACAAAATTGCATCCAAAGGTAAACTGAAAGAAGCTGAAGGTAGGAAAATATTCCAGCAGTTGATTGATTGTGTGAGCTTCTGCCACAATAAAGGTGTCTTCCACAGGGATCTCAAGGCAGATGGGTTGCTGCATACAACATGTGGAAGTCCCAATTATGTTGCCCCTGAAATTCTTGCCAATAAAGGCTATGATGGTGCAACATCAGACATATGGTCATGTGGTGTTATCTTGTATGTAATTCTAACAGGATACCTTCCTTTTGATGACAGAAATCTTGCAGTTCTCTATCAAAAGATTTTTAAAGGAGAAGTTCAGATACCAAGATGGCTATCACCTGGTTCTCAAAACATTATAAAGAGAATGCTTGATGCCAATCCTAAAACCCGGATAACAATGGCTATGATCAAAGAAGATGAATGGTTCAAGGAGGGTTATACTCCTGCAAATCCAGAAGATGAGGAAGAGAGTGTGTATATTGATGACGAAGACTTTTCAATCCATGATGTGTCACATGAAGCAGATCAAGGGTGTCCAAGATCACCAACACTTATCAATGCATTCCAGTTGATATCAATGTCTTCAAGTCTAGATCTCTCTGGTCTTTTTGAGCAAGAGGATGTTTCTGAGAGGAAGATAAGATTTACATCCATCCATTCACCAAAAGATTTGGTTGAGAGGATAGAAGACATTGTAACAGAAATGGGATTCAGAGTCCAGAAGAAAAATGGGATGTTGAAAGTGATACAAGAGATCAAAGTACAGAAATGTCCAGGTAGCTTCTCAGTGGAAGCAGAGGTGTTTGAAATAAGTCCATCCTTGTATGTAGTAGAGTTAAGTAAGTCTTGTGGAGATGCTTCTCTATATAGACAGTTATGTAAGAAGTTATCAAATGATTTGGGTGTTCACACAAGGCAACAACTAGGGAGCTCAGAAGTGATGGCCTAA 1263 0.3967 MVILNLGRKEEQGVRLGKYELGKTLGEGNFGKVKLARDTHSGKLFAVKILDKSKIIDLNNIDQIKREISTLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKIASKGKLKEAEGRKIFQQLIDCVSFCHNKGVFHRDLKADGLLHTTCGSPNYVAPEILANKGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGEVQIPRWLSPGSQNIIKRMLDANPKTRITMAMIKEDEWFKEGYTPANPEDEEESVYIDDEDFSIHDVSHEADQGCPRSPTLINAFQLISMSSSLDLSGLFEQEDVSERKIRFTSIHSPKDLVERIEDIVTEMGFRVQKKNGMLKVIQEIKVQKCPGSFSVEAEVFEISPSLYVVELSKSCGDASLYRQLCKKLSNDLGVHTRQQLGSSEVMA* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0667 420 CDD CIPK_C 291 402 - -
Gso9g0667 420 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Gso9g0667 420 ProSiteProfiles NAF domain profile. 285 309 IPR018451 GO:0007165
Gso9g0667 420 Gene3D Transferase(Phosphotransferase) domain 1 9 148 - -
Gso9g0667 420 Gene3D Transferase(Phosphotransferase) domain 1 149 289 - -
Gso9g0667 420 ProSiteProfiles Protein kinase domain profile. 19 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0667 420 Pfam Protein kinase domain 19 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0667 420 Pfam Protein kinase domain 150 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0667 420 Pfam NAF domain 287 346 IPR004041 GO:0007165
Gso9g0667 420 Gene3D Kinase associated domain 1, KA1 290 407 - -
Gso9g0667 420 PANTHER CBL-INTERACTING PROTEIN KINASE 21 10 145 - -
Gso9g0667 420 PANTHER CBL-INTERACTING PROTEIN KINASE 21 145 412 - -
Gso9g0667 420 PANTHER - 145 412 - -
Gso9g0667 420 PANTHER - 10 145 - -
Gso9g0667 420 SUPERFAMILY Protein kinase-like (PK-like) 15 292 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0667 Gso-Chr9 8832465 8840244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0667 82 412 CBL-interacting serine-threonine protein kinases AT3G17510 62.117 7.65e-146 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso9g0667 Pkinase 4.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0667 K07198 - gmx:100815660 821.231