Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0651 ATGGCTGCTGGTGTCACTGTCAAGTCCGAGGTTCTAGAATCTTCTCCCCCTGAAGGAGTATGTTCCAACACGGAGGAAAACCACCTGGTTCAGACCAATTTGTCTGATGGGTCACCCAACAAGTATGTTTCTAACAAGTCTGTGCCAGCATCTGGACTTAATGCAGTGATTCCTAGTGCAAATCAGCTTACCATCTTCTATAATGGGAGTGTTTGTGTCTATGATGGAATCCCTGCAGAGAAGGTGCATGAAATAATGCTTATTGCTGCTGCTGCTGCCAAGTCTACTGAAATGAAGAAGATTGTGACCCAAACTACCCTCATTTCACCCGTTCCCTCTAGGCCTTCTTCTCCACATGGAATCACTAACAATATTGCTTCCTCGCAGAAGAGTTCCATCTGCAGGCTCCAAGCTGAATTTCCAATAGCACGCAGGCATTCACTTCAAAGGTTTCTTGAGAAGCGTCGTGACAGGCTTGGGAGCAAGGCACCTTATCCTTCCTCATCAACCACAAAAGTGGCTGACAACATAGAGAACAACTTCTGTGCTGACAATGCACCAGAACTGGTTTCCTTGAACCGATCTGAGGAGGAATTTCAGCCAACGGTCTCTGCCTCTTGA 621 0.467 MAAGVTVKSEVLESSPPEGVCSNTEENHLVQTNLSDGSPNKYVSNKSVPASGLNAVIPSANQLTIFYNGSVCVYDGIPAEKVHEIMLIAAAAAKSTEMKKIVTQTTLISPVPSRPSSPHGITNNIASSQKSSICRLQAEFPIARRHSLQRFLEKRRDRLGSKAPYPSSSTTKVADNIENNFCADNAPELVSLNRSEEEFQPTVSAS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0651 206 ProSiteProfiles Tify domain profile. 56 91 IPR010399 -
Gso9g0651 206 SMART tify_2 56 91 IPR010399 -
Gso9g0651 206 Pfam tify domain 58 90 IPR010399 -
Gso9g0651 206 PANTHER DIVERGENT CCT MOTIF PROTEIN 32 184 - -
Gso9g0651 206 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 32 184 IPR040390 -
Gso9g0651 206 MobiDBLite consensus disorder prediction 1 23 - -
Gso9g0651 206 Pfam Jas motif 141 165 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0651 Gso-Chr9 8420673 8424661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0651 61 172 Tify Gene Family AT5G20900 52.101 5.05e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gso9g0651 tify 1.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0651 K13464 - gmx:100306045 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1527 15 18596643 18600572 Gso9g0651 9 8420673 8424661 GST
Gso13g0857 13 22895638 22898296 Gso9g0651 9 8420673 8424661 PCT
Gso17g0359 17 3243895 3246561 Gso9g0651 9 8420673 8424661 PCT
Gso9g0651 9 8420673 8424661 Gso13g0857 13 22895638 22898296 PCT
Gso9g0651 9 8420673 8424661 Gso17g0359 17 3243895 3246561 PCT