Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0647 ATGGCACTTTCTTCAAAGAAAGAGTTATCTCAAATAGCAGCAACACCAAAACTCACTATCACACTCATCTTCTTCTTCGTGCTGTTTCTGACCGCACTTGGCAACACCAACACCAACACGGTGGGATCGGAGTTGCTGAAGGTTGCTCCTTCCGAATTCGCTGGGACAGTGAGAACCGTCGTTGATGTGTTGCAAGATATTACCTCCATTCTCTCCGAGTTCGGTTCTGGCTTCGGCGATTCGCGTCTTTCTAACGCCGTTTCTGATTGTCTTGAGTTGCTTGACATGTCCTCTGATGAACTCGATTGGTCTGTCTCCGCTACCCAGAGTCCCAAAGGGAAGCACAACAGCACAGGGAACACAAGTTCCGATTTGAGAACATGGCTAAGCGCAGCACTTGCAAATCAAGACACATGCATGGACGGATTCGACGGCACCAACGGTATAGTGAAGGGTCTAGTATCCACAGGTCTAGGCCAAGTGATGTCATTGCTGCAACAACTTCTCACACAGGTGAATCCAGTGTCGGACCACTACACTTTCTCTTCCCCACAGGGCCATTTTCCTCCATGGGTTAAACCAGGGGAAAGAAAACTACTCCAAGCAGCAAATGGGGTGAGTTTTGACGCTGTGGTGGCTGCCGACGGGACCGGAAACTTCACCAAGGTGATGGACGCGGTTTTGGCTGCGCCTAACTACAGCATGCAAAGGTATGTGATACATATAAAGAGAGGGGTTTACAATGAGAACGTTGAGATCAAGAAGAAGAAGTGGAACCTCATGATGGTTGGAGATGGCATGGATAACACTGTGATTTCTGGTAACAGAAGTTTTATTGATGGTTGGACCACGTTCCGGTCAGCTACCTTTGCTGTGAGTGGCAGAGGATTCGTAGCACGAGACATTACCTTCCAAAACACGGCAGGACCAGAGAAGCACCAAGCAGTGGCACTAAGATCAGACTCAGACCTCTCTGTGTTCTTCCGATGTGGGATCTTCGGTTACCAAGACAGCCTCTACACACACACCATGCGCCAATTCTACAGAGAGTGCAAAATCAGTGGCACAGTGGACTTCATCTTCGGTGATGCCACAGCAATTTTCCAAAACTGCCACATCTCAGCCAAAAAAGGGTTACCAAATCAAAAGAACACAATCACAGCACATGGCAGAAAAAACCCAGATGAACCAACAGGCTTCTCAATCCAATTTTGCAACATTTCTGCTGATTATGACCTTGTGAACTCGATTAATAATAACTCTAACAATTCCATCGGCACGTACCTTGGTAGGCCTTGGAAACCCTATTCCAGGACAGTTTTCATGCAATCTTACATTAGTGATGTGTTGAGGCCAGAAGGGTGGTTGGAGTGGAATGGTGATTTTGCTTTGGATACTTTGTACTATGCTGAGTACATGAATTATGGGCCTGGTGCTGGAGTGGCTAATAGGGTTAAATGGCCAGGGTACCATGTGATGAATGATTCTAGCCAAGCTAGTAATTTCACTGTGTCACAGTTTATCGAGGGAAATCTTTGGTTGCCTTCAACGGGTGTAACGTTCACGGCTGGATTGGGGGGTGTATGA 1587 0.4713 MALSSKKELSQIAATPKLTITLIFFFVLFLTALGNTNTNTVGSELLKVAPSEFAGTVRTVVDVLQDITSILSEFGSGFGDSRLSNAVSDCLELLDMSSDELDWSVSATQSPKGKHNSTGNTSSDLRTWLSAALANQDTCMDGFDGTNGIVKGLVSTGLGQVMSLLQQLLTQVNPVSDHYTFSSPQGHFPPWVKPGERKLLQAANGVSFDAVVAADGTGNFTKVMDAVLAAPNYSMQRYVIHIKRGVYNENVEIKKKKWNLMMVGDGMDNTVISGNRSFIDGWTTFRSATFAVSGRGFVARDITFQNTAGPEKHQAVALRSDSDLSVFFRCGIFGYQDSLYTHTMRQFYRECKISGTVDFIFGDATAIFQNCHISAKKGLPNQKNTITAHGRKNPDEPTGFSIQFCNISADYDLVNSINNNSNNSIGTYLGRPWKPYSRTVFMQSYISDVLRPEGWLEWNGDFALDTLYYAEYMNYGPGAGVANRVKWPGYHVMNDSSQASNFTVSQFIEGNLWLPSTGVTFTAGLGGV* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0647 528 ProSitePatterns Pectinesterase signature 1. 234 253 IPR018040 -
Gso9g0647 528 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 47 525 - -
Gso9g0647 528 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 174 IPR035513 -
Gso9g0647 528 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 165 IPR035513 -
Gso9g0647 528 ProSitePatterns Pectinesterase signature 2. 353 362 IPR033131 -
Gso9g0647 528 SUPERFAMILY Pectin lyase-like 206 524 IPR011050 -
Gso9g0647 528 Pfam Pectinesterase 209 511 IPR000070 GO:0030599|GO:0042545
Gso9g0647 528 Pfam Plant invertase/pectin methylesterase inhibitor 47 157 IPR006501 GO:0004857
Gso9g0647 528 Gene3D - 204 525 IPR012334 -
Gso9g0647 528 CDD PMEI-like_4 19 176 - -
Gso9g0647 528 SMART PMEI_2 29 171 IPR006501 GO:0004857
Gso9g0647 528 PANTHER PECTINESTERASE 47 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0647 Gso-Chr9 8327664 8332375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0647 23 525 Carbohydrate Esterase AT3G43270 64.313 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0647 K01051 - gmx:100801813 1048.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1525 15 18436643 18442008 Gso9g0647 9 8327664 8332375 GST