Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0646 ATGGCTGTTTTCTCGACCAAACAGCTGAGTACTTCAACTCTGACCACCACATTCATCATCTTCTTTGTTCGCTCTGAATTCGCGGGACTCGGTAGCCTGAGAGTTTCTCCTTCTGAATTCATAGGCTCGGTGACCACAGTAGGCGATGTTTTGCAAAACGTTACCTCCATTCTCAAGTCTGAGTTCGTCAGCAATGTCAACAATAATGAGTTTCATCTTTATGATGCCGCCGCCATTTTTGCCTGTCTCGATTTGTTAGACTTGTCAGCTGATGAACTCAGCTGGTCCATTTCCGCTGTTCAAAGTCCCCAAGGGAATGATAACAGTACTGGTAATCTGAGCTCTGATTTGAGGACATGGCTGAGCGCTGTACTAGCGAATACAGATACATGCATGGAAGATTTTGAAGGTACAAATGGTAATGTGAAGGGTTTAATATCCACAGAAATTGATCAAGCAAAGTGGTTACTCCAAAAGCTACTGACCCAGGTGAAGCCATATGTGAATGATTTCAGCAGTAGAAATAGTAGGGATAAATTTCCTTCATGGGTTGAAGCAGAGGATAAGTTGTTGCTGCAGACAAATGTGGTGTCTGCGGATGCTGTAGTTGCTGCCGATGGGACTGGGAATTTTACTAAGGTGATGGATGCTGTGGAAGCAGCACCTGTTTATAGCATGAAACGCTTTGTGATTCACATAAAGAAAGGTGTTTACACCGAGAATGTTGTGATTAAGAAGAAGAAGTGGAACCTTGTGGTGATTGGTGAGGGTATGGATGTCGCTATTATCTCCGCTAATCTGAGTCGTAATGAAAATTTGACCACATTCAAGACAGCTACCTTTGCTGTGAATGGCAGAGGATTCATAGCAAAAGGCATTACCTTCAGGAACACTGCAGGACCCAAAAGAAACCAATCTGTTGCTCTAAGATCAGACTCAGACCTCTCTGTGTTCTATCGATGTGGGATTTATGGCTACCAAGACAGCCTCTACGCCCACTCCTTGCGCCAATTCTACAGAGAATGCAAAATCAGTGGCACGGTGGATTTCATATTCGGCCATGCCAATGCAGTGTTCCAAAACTGCACAATATTGGCCAAGAAAGGCTTACAAAGCCAGAAGAACACAATCACAGCTCAAGGCGAAACGTACGCCGATCAATCGTCTGGTTTCACCATCCAATTCTGCAACATTTCAGCGGATTATGACCTTCTGCCCTATCTTAATACCACCTCAACGTACCTCGGAAGGCCGTGGAAGCCGTATTCTAGAACAATTTTCATGCAGTCCTACATCAGTGAGGTGTTAAATCCTAAAGGGTGGCTAGAGTGGAATGGAACAATGTATTTGGACACTTTGTACTATGCTGAGTACAAGAATTTTGGACCAGGAGCTAGGCTTGATAATAGAGTTAAATGGCCAGGGTACCATGTGATGAATGATTCTAGCCAAGCTTTTAACTTCACTGTGACCAATCTTATTTTGGGGGAACTATGGCTACCTTCAACTGGTGTAACATTCATTCCTGGACTTTGA 1536 0.4388 MAVFSTKQLSTSTLTTTFIIFFVRSEFAGLGSLRVSPSEFIGSVTTVGDVLQNVTSILKSEFVSNVNNNEFHLYDAAAIFACLDLLDLSADELSWSISAVQSPQGNDNSTGNLSSDLRTWLSAVLANTDTCMEDFEGTNGNVKGLISTEIDQAKWLLQKLLTQVKPYVNDFSSRNSRDKFPSWVEAEDKLLLQTNVVSADAVVAADGTGNFTKVMDAVEAAPVYSMKRFVIHIKKGVYTENVVIKKKKWNLVVIGEGMDVAIISANLSRNENLTTFKTATFAVNGRGFIAKGITFRNTAGPKRNQSVALRSDSDLSVFYRCGIYGYQDSLYAHSLRQFYRECKISGTVDFIFGHANAVFQNCTILAKKGLQSQKNTITAQGETYADQSSGFTIQFCNISADYDLLPYLNTTSTYLGRPWKPYSRTIFMQSYISEVLNPKGWLEWNGTMYLDTLYYAEYKNFGPGARLDNRVKWPGYHVMNDSSQAFNFTVTNLILGELWLPSTGVTFIPGL* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0646 511 ProSitePatterns Pectinesterase signature 2. 344 353 IPR033131 -
Gso9g0646 511 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 154 IPR035513 -
Gso9g0646 511 SMART PMEI_2 36 163 IPR006501 GO:0004857
Gso9g0646 511 SUPERFAMILY Pectin lyase-like 196 510 IPR011050 -
Gso9g0646 511 Pfam Pectinesterase 200 496 IPR000070 GO:0030599|GO:0042545
Gso9g0646 511 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 165 IPR035513 -
Gso9g0646 511 CDD PMEI-like_4 25 166 - -
Gso9g0646 511 Pfam Plant invertase/pectin methylesterase inhibitor 62 158 IPR006501 GO:0004857
Gso9g0646 511 Gene3D - 194 511 IPR012334 -
Gso9g0646 511 PANTHER PECTINESTERASE 35 510 - -
Gso9g0646 511 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 35 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0646 Gso-Chr9 8240161 8243274 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0646 22 511 Carbohydrate Esterase AT3G43270 57.171 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0646 K01051 - gmx:100798620 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1524 15 18412329 18415608 Gso9g0646 9 8240161 8243274 GST
Gso13g0850 13 22823978 22828350 Gso9g0646 9 8240161 8243274 PCT
Gso17g0368 17 3316774 3320393 Gso9g0646 9 8240161 8243274 PCT
Gso9g0646 9 8240161 8243274 Gso13g0850 13 22823978 22828350 PCT
Gso9g0646 9 8240161 8243274 Gso17g0368 17 3316774 3320393 PCT