Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0644 ATGGCTTATTCATCTCATAAACTCTTCTTCCTTCTGTTTGCAATTTTCTTCTCACACGCTAGTGCTGTAAACTCTTCCAATGCTTCCACAACAATTCACACCAATCTCTCTTCCATAAAATCTTTCTGCACAACCACAGCTTACCCAGAAGTTTGTTTCAACTCATTGAAGCTATCCATCTCAATAAACATAAGTCCAAACATAATCAACTACCTCCGTCAGTCCCTCCAAGTAGCAATATCTGAAACCACAAAGCTCTCAAATCTCTTCCACAACGTTGGACACTCAAAAAACATCATAGAGAAGCAAAGAGGGTCAGTTCAAGACTGCAGGGAACTCCATCAATCCACATTGGCTTCTTTGAAAAGATCACTATCAGGGATCCGTTCTTCCAACTCCAAGAACATAGTTGATGCAAGAAGCTACCTCAGTGCAGCCTTAACAAACAAAAACACATGTCTAGAAGGCCTAGATTCTGCTTCAGGAACAATGAAGCCATCTCTGGTGAAATCTGTGATCAACACTTACAAGCATGTAAGTAACTCACTTTCAATGCTCCCTAAGCCAGAGATGGGGACTCCCAAAGTGAAAAAGAATAATAACCAGCCTTTGAAGAATGCTCCAAAGTGGGTATCAAGCAGTGACCAAAGGCTCTTCCAAGACTCAGATGGGGAAGATTATGACCCAAATGAAATGCTTGTTGTGGCTGCAGATGGAACTGGGAACTTTAGCACCATCACTGAAGCCATTAACTTTGCTCCAAACAACAGTATGGATAGGATAGTGATCTATGTCAAGGAAGGGATTTACGAGGAAAATGTGGAAATTCCAAGCTATAAGACCAACATTATGATGCTTGGCGATGGAAGTGATGTCACTTTCATAACTGGTAACAGAAGCGTCGGTGATGGCTGGACCACTTTCAGATCTGCAACTCTAGCTGTTTCTGGTGATGGTTTTCTGGCACGTGATATAGCCATTGAGAACAGTGCAGGGCCAGAGAAGCATCAAGCAGTGGCATTGAGAGTAAATGCAGACTTAGCAGCCTTTTACAGGTGTGCAATTTATGGCTACCAAGACACTCTCTATGTTCACTCCTTTAGACAATTCTATAGAGAGTGTGACATTTATGGCACCATAGATTACATATTTGGGAATGCAGCCGCGATTCTACAAGAATGCAACATCATATCAAGAAAACCAATGCCTGGCCAATTCACAGTAATCACTGCACAATCAAGAGATAGCCCTGATGAGGACACTGGCATCTCATTCCAAAACTGCTCAATCATAGCAACCCTTGATCTCTATTCCAACTCTAGTAGCTTCAAGAGCTACCTTGGGAGGCCATGGAGGATCTATTCTCGCACCGTTTACCTTGAGTCCTACATTGATGACTTCATTGACCCAAAGGGTTGGACAAAGTGGTCTAATGAGCAAGGATTGGAAACTTTGTATTATGGTGAGTATGACAACTATGGACCTGGTTCCAGCATAGATAAGCGTGTACAATGGTTAGGGTACCATTTGATGGATTATGGTGATGCCTATAATTTCACTGTTTCGGAGTTCATCAATGGAGATGGTTGGCTTGATACCACTTCCGTTCCTTATGATGACGGGATTTGA 1629 0.4236 MAYSSHKLFFLLFAIFFSHASAVNSSNASTTIHTNLSSIKSFCTTTAYPEVCFNSLKLSISINISPNIINYLRQSLQVAISETTKLSNLFHNVGHSKNIIEKQRGSVQDCRELHQSTLASLKRSLSGIRSSNSKNIVDARSYLSAALTNKNTCLEGLDSASGTMKPSLVKSVINTYKHVSNSLSMLPKPEMGTPKVKKNNNQPLKNAPKWVSSSDQRLFQDSDGEDYDPNEMLVVAADGTGNFSTITEAINFAPNNSMDRIVIYVKEGIYEENVEIPSYKTNIMMLGDGSDVTFITGNRSVGDGWTTFRSATLAVSGDGFLARDIAIENSAGPEKHQAVALRVNADLAAFYRCAIYGYQDTLYVHSFRQFYRECDIYGTIDYIFGNAAAILQECNIISRKPMPGQFTVITAQSRDSPDEDTGISFQNCSIIATLDLYSNSSSFKSYLGRPWRIYSRTVYLESYIDDFIDPKGWTKWSNEQGLETLYYGEYDNYGPGSSIDKRVQWLGYHLMDYGDAYNFTVSEFINGDGWLDTTSVPYDDGI* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0644 542 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 186 IPR006501 GO:0004857
Gso9g0644 542 CDD PMEI-like_3 41 185 - -
Gso9g0644 542 PANTHER PECTINESTERASE 7 541 - -
Gso9g0644 542 MobiDBLite consensus disorder prediction 195 212 - -
Gso9g0644 542 PANTHER PECTINESTERASE 7 541 - -
Gso9g0644 542 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 188 IPR035513 -
Gso9g0644 542 MobiDBLite consensus disorder prediction 186 212 - -
Gso9g0644 542 Gene3D - 228 542 IPR012334 -
Gso9g0644 542 SMART PMEI_2 34 185 IPR006501 GO:0004857
Gso9g0644 542 Pfam Plant invertase/pectin methylesterase inhibitor 38 185 IPR006501 GO:0004857
Gso9g0644 542 Pfam Pectinesterase 233 528 IPR000070 GO:0030599|GO:0042545
Gso9g0644 542 ProSitePatterns Pectinesterase signature 2. 376 385 IPR033131 -
Gso9g0644 542 SUPERFAMILY Pectin lyase-like 230 539 IPR011050 -
Gso9g0644 542 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 186 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0644 Gso-Chr9 8187268 8189654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0644 37 542 Carbohydrate Esterase AT2G26440 67.641 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0644 - - gmx:102665651 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1522 15 18342335 18345203 Gso9g0644 9 8187268 8189654 GST