Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0643 ATGGCGTTCCAGGATTTCGACATGATCACCGAACGGCGGAGGAACGAGGAGAGGCTTAAGATGAAGAAGAAGATCCTCATCGGTCTCATCTCCGCCGTCCTCCTCGCGTGCGTCATAGGCGCCGCGACATTCGTGGTTGTCCAAAGAACAGGCCCTAATAATAATCCAAAGCACGCCACGCCATTGCCACAGAACTCCGCCGCCACGTCACACGTGGACCAAAACTCCAGGCTGGTGAAGATGATTTGCGGATCCGCTGAATACAAGGAAAAATGCGAAACCACCCTCGGAGAAGCCCTAAAGAAGGACCCCAAATTGGCGCAGCCAAAAGACCTAATGATGGTGTCCATGATTCTGGCCGAGAAGGAGGTTACAAAGGCCTTCGACGGAACGGCAAAGATGATGGACAAGGCCTCTGAGGAGGAGAAGGGGGCGTACGAGGATTGCCAGGGCTTGTTCAAGGACGCCAAGGAAGAGCTTGAGTTGTCGATCACCGAGGTGGGTGATAACGACGCGGACAGGCTCTCCACAAAGGGTGCTGAATTGAACAACTGGCTTAGTGCGGTTATGTCTTACCAACAAACCTGCATTGATGGTTTCCCCAAAGGGAAGATCAAGGATGAGTTAAGCAACATGTTTAATGAGTCCAAGGAGCTTGTGAGCAACTCCCTCGCCGTTGTTTCGCAGTTCTCTTCGTTCTTTTCGATCTTCCAAGGCGCCGGGGAGCTTCATCTTCCTTGGGAGATTACCAGTGATGATGCACCTGCACCTACTACTGCTTCTGCTTCTGCTGTTGGTGCTGGTTTTGGGTCTATATTTGGTTCTGGTTCTTCTTCTTTTGGTTATGCTTCTGCTCCTGGTGTTGCTCCTACTACTACAGGTGTTGCTCCTACTACTGCAGGTGCTGCTCTTGCTCCTGGTGTTGCTCCTGGCCCAGTTCCTTCTTGGGCTGCAGGTTCCATTCCTGCATGGGCTGGTCCAGTTTCTGTTTGGGCCGGCCCTGCTGAGTTTATCGGATCAAATGAGAAACCCACACCTAATGTCACCGTGGCAAAAGATGGCAGCGGAAACTTCAAAACCATCTCTGAAGCTTTGGCTGCCATCCCATCAAAATACGACGGAAGGTACGTGGTTTATGTTAAAGAAGGAGTGTACGATGAGACCGTGACAGTGACAAAGAAAATGCTAAACGTAACCATGTACGGTGACGGACAGCAAAAGAGTATCATCACTGGCAACAAAAATTTCGTGGATGGAGTCAGGACTTTCCAAACTGCATCATTCGTTGTACTTGGAGGTGGATTCTTGGCGAAAGACATGGGATTCAGAAACACAGCCGGTGCAGAGAAGCACCAGGCAGTGGCCGCAAGAGTGCAAGCCGACCAAGCCATATTCTTCAACTGCGCCTTCGAGGGCTACCAAGACACTCTTTATGCCCAAACCCACAGGCAATTCTATCGCGACTGCTACATCTCTGGAACAATCGACTTCATCTTTGGTGACGCCTCTGCCGTTTTCCAGAACTGCACCATGGTGGTAAGAAAGCCACTTGACAACCAACAGAACATCGTGACAGCACAAGGAAGGCTCGACAAGCAAGAAAACACTGGCTTCGTCCTCCAGAAGTGCGTTATCAAGGCCGGCACAGATTTGGTTCCGGTGAAGGACAGAATCAAGAATTACCTCGGAAGGCCATGGAAGGAGTATTCAAGAACCATCATCATGGAGACTCAGATTGATGACCTAATTCACCCTGATGGGTTTCTTCCCTGGGAAGGGAACTTTGCCCTAAGCACCCTTTACTACGGAGAGTACAACAACAATGGGGCTGGTTCCATCACCACTGCTAGGGTTAATTGGCCTGGCCGTAAAGTCATCAATAGAGATGAGGCTACCAGGTACACAGTTGAGGCTTTCTTGCAAGGGACATGGATCAATGGCACAGGTGTACCAGCTCAACTAGGCTTGTACAATTAA 1977 0.5033 MAFQDFDMITERRRNEERLKMKKKILIGLISAVLLACVIGAATFVVVQRTGPNNNPKHATPLPQNSAATSHVDQNSRLVKMICGSAEYKEKCETTLGEALKKDPKLAQPKDLMMVSMILAEKEVTKAFDGTAKMMDKASEEEKGAYEDCQGLFKDAKEELELSITEVGDNDADRLSTKGAELNNWLSAVMSYQQTCIDGFPKGKIKDELSNMFNESKELVSNSLAVVSQFSSFFSIFQGAGELHLPWEITSDDAPAPTTASASAVGAGFGSIFGSGSSSFGYASAPGVAPTTTGVAPTTAGAALAPGVAPGPVPSWAAGSIPAWAGPVSVWAGPAEFIGSNEKPTPNVTVAKDGSGNFKTISEALAAIPSKYDGRYVVYVKEGVYDETVTVTKKMLNVTMYGDGQQKSIITGNKNFVDGVRTFQTASFVVLGGGFLAKDMGFRNTAGAEKHQAVAARVQADQAIFFNCAFEGYQDTLYAQTHRQFYRDCYISGTIDFIFGDASAVFQNCTMVVRKPLDNQQNIVTAQGRLDKQENTGFVLQKCVIKAGTDLVPVKDRIKNYLGRPWKEYSRTIIMETQIDDLIHPDGFLPWEGNFALSTLYYGEYNNNGAGSITTARVNWPGRKVINRDEATRYTVEAFLQGTWINGTGVPAQLGLYN* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0643 658 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 45-RELATED 14 656 - -
Gso9g0643 658 PANTHER PECTINESTERASE 14 656 - -
Gso9g0643 658 TIGRFAM PME_inhib: pectinesterase inhibitor domain 67 229 IPR006501 GO:0004857
Gso9g0643 658 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 230 IPR035513 -
Gso9g0643 658 SMART PMEI_2 74 226 IPR006501 GO:0004857
Gso9g0643 658 SUPERFAMILY Pectin lyase-like 344 651 IPR011050 -
Gso9g0643 658 Pfam Plant invertase/pectin methylesterase inhibitor 78 225 IPR006501 GO:0004857
Gso9g0643 658 ProSitePatterns Pectinesterase signature 2. 491 500 IPR033131 -
Gso9g0643 658 Gene3D - 341 656 IPR012334 -
Gso9g0643 658 CDD PMEI-like_3 82 227 - -
Gso9g0643 658 Pfam Pectinesterase 347 642 IPR000070 GO:0030599|GO:0042545
Gso9g0643 658 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 231 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0643 Gso-Chr9 8176275 8179447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0643 313 658 Carbohydrate Esterase AT2G26450 59.366 5.61e-146 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0643 - - gmx:100796485 1169.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1521 15 18336772 18339339 Gso9g0643 9 8176275 8179447 GST
Gso17g0369 17 3326772 3329393 Gso9g0643 9 8176275 8179447 PCT
Gso9g0643 9 8176275 8179447 Gso17g0369 17 3326772 3329393 PCT