Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0640 ATGTCAGACAATAACACTACTCCTCAAATAAAGTATGATGTTTTTGTTAGCTTCAGGGGCAAGGACATCCGCCAGGACTTTCTTAGCCATTTGGTTGAGGCTTTTGACATGAAGAGAATATATGCCTTTGTAGATAATAAACTTGAGAAAGGGGAAAAGATATGGAAATCACTTGTTGAAGCAATTGAAGGATCATTGATTTCATTGATCATATTTTCACAAGGCTATGCTTCTTCTCATTGGTGTTTAGAAGAACTTGAGAAAATACATGAATGCAAAGAGAAATATGGACAAATTATAATCCCCGTTTTCTACCATTTAGAACCCACACATGTACGATATCAATCATCTGATGCATTCGAAAAAGCATTTGCTAAGCATGGAAAAAAATATGAGAGCAAGGTGCAACAATGGAGAGATATTTTGAAGAAATCTGCTGATTTATCAGGAATCGAGTCATCAAACTTTAAAACTGATGCTGAGTTGGTTAAAAAAATTACCAATGTTGTGCTGATGAGGCTGCATAAAACCCATGTTAACTTGAAAAGACTTGTTGGAATTGGCAAAAAAATTGCAGATGTGGAATTGTTGATACGCAAAGAACCAGAAGACATCCGTCTTATTGGATTATGGGGTATGGGCGGTATTGGCAAGACAATCCTTGCAGAACAAGTATTTATTAAACTACGGTCTGGATATGGAGGTTGTTTATTTTTAGCCAATGAAAGAGAACAATCAAGGAAACATGGGATGCTTTCTTTGAAGGAAAAAGTTTTTTCTGAACTACTAGGAAATGGTGTTAAAATTGACACGCCAAATTCGTTGCCTGATGATATTGTTAGGAGAATTGGTCGAATGAAAGTTCTTATTGTTCTTGATGATGTGAATGATTCAAATCACTTAGAAAAATTACTTGGACCTCTTGGTAATTTTGGATCAGGTAGTAGAATCATTGTAACAACTAGAGATATGCAAGTTCTTAAAGCTAACAAAGCTGATGAGGTATACCCGCTTAGAGAATTCAGTTTAAATCAAGCACTTGAACTTTTCAATTTGAATTTCTTTAACCAATGTGATGATCAAAGGGAGTATGACAACTTATCAAAAAGGGTGGTCAATTATGCCAAAGGCATTCCATTAGTTCTTAATGAGTTGGCTTATCTTCTTCGTGCAAGAAATAAGGAAGAGTGGGGAAGTGAGTTAGACAAGCTTGAAAAAATACCTCTTCCAGAAGTTTATGATAGAATGAAACTGAGCTATGATGATCTAGATCCCAAAGAGCAACAAATTTTTCTAGATCTTGCGTTTTTCTTTGGTAGATCACATACAGAGATAAAGGTGGACTATCTGAAATCTTTATTGAAAAAAGATGGTGAAAGTGGAGATTCAGTGTTTATTGTGTTAGAAAGGATGAAAGATAAAGCTCTCATAACTTCCTCTAAAGATAATTTTATATCTATGCATGATAGTTTACAAGTTATGGCTCAGGAGATTGTTCGTCGAAAGTCTAGCAATACTGGAAGCCACAGTCGGTGGTGGGATCTTGATGACATTCATGGAGAAATGAAAAATGACAAGGTTACTGAGGCCATTAGAAGTATACAAATTAACTTGCCAAAAATTAAGGAGCAAAAGTTAACGCATCACATATTTGCTAAGATGAGCAGTCTAAAATTTCTGAAAATTTCTGGCGAAGATAATTATGGTAACGATCAACTTATTCTTGCTGAAGAGCTTCAATTTTCGGCAAGTGAACTAAGATTTCTTTGTTGGGATCATTGCCCTCTAAAATCCTTACCAGAAAGTTTTTCTAAGGAAAAACTTGTAATGTTGAAATTGCTACGCAGCAAAATAGAAAAACTTTGGGATGGAGTTCAGAATTTGGTGAATTTAAAAGAAATTAACCTCAGTGGCTCTGAGAAGTTAAAGGAGCTGCCAGATTTATCAAAAGCCACAAATCTTGAAGTACTGCTTCTCCGTGGTTGTTCTATGTTGACTAGTGTGCATCCATCTGTTTTCTCTCTGATAAAACTTGAGAAATTGGACCTTTATGGCTGTGGCTCCCTTACCATTCTCTCAAGCCATTCTATATGCAGCCTTAGTTATCTCAACCTTGAACGTTGCGTGAACCTTAGGGAATTCTCAGTGATGTCGATGAATATGAAAGACCTGAGATTAGGATGGACCAAGGTCAAAGAACTTCCCTCATCATTTGAACAGCAAAGCAAGCTTAAATTGCTACATCTAAAAGGAAGTGCCATTGAGAGGTTACCTTCATCCTTCAACAACCTTACACAACTGCTACATCTAGAGGTAAGCAATTGCAGCAATCTTCAAACAATACCAGAGCTTCCGCCGCTCCTTAAAACTCTAAATGCACAATCCTGCACCTCACTTCTGACTCTACCAGAGATTTCCTTGTCCATTAAAACTCTAAGTGCCATAGACTGCAAATCATTGGAGACTGTATTTCTTTCATCGGCTGTCGAACAATTAAAGAAAAATAGGAGACAGGTTCGGTTCTGGAATTGCTTGAACTTGAATAAAGATTCTCTAGTGGCTATTGCGTTGAATGCACAAATCGATGTGATGAAATTTGCAAACCAACACTTATCTCCACCAAGTCAAGATCTTGTTCAAAATTACGATGATTATGATGCCAATCATCGCTCTTATCAAGTGGTTTACGTGTATCCAGGAAGCAATGTTCCAGAGTGGTTGGAGTATAAGACAACAAATGCTTATATAATTATTGATCTCTCTTCTGGTCCACCTTTCCCCTTCCTTGGCTTCATTTTCAGCTTTGTCATTGGTGAGTACCTACACACAGACACCAAGGGCAGACTTGAAGTTAGCATCACTATAAGTGATGATGAGAGTGAAGGCAATCAGGATAGTGTCAGAATGTACATAGATTTTGAAGGTAGGAAAATTGAATCAGATCATGTGTGTGTGGTGTATGACCAAAGATGTTCCAGCTTCCTAAGTAGCAAGGTCAAAAATCAAACAAGGTTAAAAATCAAGGTTACAATGGGGGTGCCAGATTATGCACTGCCACAAGGTTATAATAGAGGTGTGAGATTCGGTGTCAGTCCAATAAGCACCTCGGCTTATGAGAGTTTCATTCAACAAATGAAATTGCGTAATTCAATATCTCAGTTTCATTAA 3168 0.3706 MSDNNTTPQIKYDVFVSFRGKDIRQDFLSHLVEAFDMKRIYAFVDNKLEKGEKIWKSLVEAIEGSLISLIIFSQGYASSHWCLEELEKIHECKEKYGQIIIPVFYHLEPTHVRYQSSDAFEKAFAKHGKKYESKVQQWRDILKKSADLSGIESSNFKTDAELVKKITNVVLMRLHKTHVNLKRLVGIGKKIADVELLIRKEPEDIRLIGLWGMGGIGKTILAEQVFIKLRSGYGGCLFLANEREQSRKHGMLSLKEKVFSELLGNGVKIDTPNSLPDDIVRRIGRMKVLIVLDDVNDSNHLEKLLGPLGNFGSGSRIIVTTRDMQVLKANKADEVYPLREFSLNQALELFNLNFFNQCDDQREYDNLSKRVVNYAKGIPLVLNELAYLLRARNKEEWGSELDKLEKIPLPEVYDRMKLSYDDLDPKEQQIFLDLAFFFGRSHTEIKVDYLKSLLKKDGESGDSVFIVLERMKDKALITSSKDNFISMHDSLQVMAQEIVRRKSSNTGSHSRWWDLDDIHGEMKNDKVTEAIRSIQINLPKIKEQKLTHHIFAKMSSLKFLKISGEDNYGNDQLILAEELQFSASELRFLCWDHCPLKSLPESFSKEKLVMLKLLRSKIEKLWDGVQNLVNLKEINLSGSEKLKELPDLSKATNLEVLLLRGCSMLTSVHPSVFSLIKLEKLDLYGCGSLTILSSHSICSLSYLNLERCVNLREFSVMSMNMKDLRLGWTKVKELPSSFEQQSKLKLLHLKGSAIERLPSSFNNLTQLLHLEVSNCSNLQTIPELPPLLKTLNAQSCTSLLTLPEISLSIKTLSAIDCKSLETVFLSSAVEQLKKNRRQVRFWNCLNLNKDSLVAIALNAQIDVMKFANQHLSPPSQDLVQNYDDYDANHRSYQVVYVYPGSNVPEWLEYKTTNAYIIIDLSSGPPFPFLGFIFSFVIGEYLHTDTKGRLEVSITISDDESEGNQDSVRMYIDFEGRKIESDHVCVVYDQRCSSFLSSKVKNQTRLKIKVTMGVPDYALPQGYNRGVRFGVSPISTSAYESFIQQMKLRNSISQFH* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0640 1055 PRINTS Disease resistance protein signature 207 222 - -
Gso9g0640 1055 PRINTS Disease resistance protein signature 282 296 - -
Gso9g0640 1055 PRINTS Disease resistance protein signature 375 389 - -
Gso9g0640 1055 PRINTS Disease resistance protein signature 762 778 - -
Gso9g0640 1055 Gene3D - 172 335 IPR027417 -
Gso9g0640 1055 Gene3D - 341 424 IPR042197 -
Gso9g0640 1055 Gene3D Ribonuclease Inhibitor 515 695 IPR032675 -
Gso9g0640 1055 Pfam TIR domain 11 176 IPR000157 GO:0007165
Gso9g0640 1055 SUPERFAMILY L domain-like 542 844 - -
Gso9g0640 1055 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 8 1050 - -
Gso9g0640 1055 Pfam NB-ARC domain 197 409 IPR002182 GO:0043531
Gso9g0640 1055 Gene3D - 9 171 IPR035897 -
Gso9g0640 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 434 IPR027417 -
Gso9g0640 1055 ProSiteProfiles TIR domain profile. 10 174 IPR000157 GO:0007165
Gso9g0640 1055 Gene3D Ribonuclease Inhibitor 696 841 IPR032675 -
Gso9g0640 1055 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 1050 IPR044974 GO:0006952
Gso9g0640 1055 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 150 IPR035897 -
Gso9g0640 1055 SMART till_3 11 148 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0640 Gso-Chr9 8134549 8140810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0640 12 816 WRKY Transcription Factor Family AT4G12020 31.181 5.67e-87 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0640 - - gmx:100794380 2081.6