Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0631 ATGACAACAACAATAAATCTTTTATCATTTTCCCTCACCCCCTTATTCTATTTCCTTTGGGTTTTATTGTATCAAAAGGGTGTGTCAAGACATTGTAGTCTCCTTGCTGTCCTGAGTGGTAAATCACGTGACATTAAGCAAAAGCAGAAGCAGGGTAATGCTTCTGAGGATCAATTTCCTTATCCCTTTCCAGAACTTTCTTCCTCTGGTCGTCTTGAGGTCAAGGTATTGATCGAACCTACGGCTGATGAACTCGGTCTAGCTCTTGAACAACTGCAGCCGGATTTTGTTTACCTGCAAGGTCAGCAGCTAGAAGATAGGGGAGAAATTGGGCCTCTTGGATGGGAAGATTTTGACTTGTCTGTCCCAGAAGCATTGTGTGGATTGTTTTCTTCCAAATTACCTAATACTGTTTATTTGGAAACTCCAAAGGGAGAAAAATTGGCAGAGGCACTTCGTAGTAAGGGAGTTCCATACACTATCTATTGGAAAAACGATTTTTCAAAGTATGCAGCTTCACATTTTCGACATTCTTTATTCTCTGTGGCACAGAGCCATACATGGGATGCTTTCCAGCTAGCTCTGGCATCTTTTAGACTATACTGTATACACAACAATGTCTTACCTTCTAACTGCCATAAGGGTGCTGGAAAGCTCGGGCCACAAATTCTTGGGGTTCCTCCCAACATTGATGTCAGTCCATGTGTAGCAGACATGAAGGAAGAGGAAGAAGATTCACCGGAGACAATTTCTGCTGTAAAGATATATGACGATGATGTGAACATGAGATTTCTTATTTGTGGAGTTCCCTGCACATTGGATGCTTGCTTGTTGGGGTCATTAGAGGATGGACTCAATGCTCTTCTATTTGCAGAAATACGCGGATGCAAACTTCACAACAGGACAAGTGCAACACCGCCACCTCTCCAGGCAGGAACATTCTCACGTGGTGTAGTGACTATGCGTTGTGATATATCAACATGTAGTTCTGCTCATATATCACTTTTGGTGTCTGGTAGTGCAGACACTTGTTTTAATGATCAGCTTTTGGAGAATCATATTAAAAAAGAGCTGATTGAGAAGAGTCAACTTGTCCAAGCATTTCCTAATCATGAACAAAGTAAAGCACCTTCCTCTGAGCCTCGAAGATCAGCCTCAGTAGCCTGTGGATCTAGTGTGTTTGAAGTTTGTATGCAAGTTCCTGCATGGGCTTCACAGGTTCTGAGACAGCTTGCACCCAATTTGTCATACCGCAGCCTTGTTATGTTGGGAATTGCTAGTATTCAGGGATTGCCAGTTGCATCGTTTAATAAAGATGATGCCGAACGCCTTCTTTTCTTTTGTACTAGGCAGGAGAAAGAAAACTGTCCCAACGATCATGTTTTCTCTGGTATTCCAAGTTGGCTGAAGCCTCCATCAACCAGTCGAAAAAGATCTGAACCATGCTCTAGTTCAAAGTCTATTAATGATAGTGGCCGGGGAGTTGAAGCCATTGGCAGTCATAGACAGAAATTTAATCTTGCTTCTATGAGGCCAATCCCTCACTCTAATAGACACAAGATTCTCCCCTTTTCTGGATTGTCTGAGGGTACAAGATATGATGGAGATCATGGAAAATCAAATCTACCACTTGCTCCTATTAAGCATAATGTTTCAGGCCCTACTTCAGTTACAAATAGGAAATCTGTGTCGAACTCATTTCAAGCTCACCAGATTATTTCTTTGAATCCACTACCTATGAAAAAGCATGGTTGTGACAGAGCTCCAATACGAGCTTGCTCTGAGGAGGAATTCTTGAGGGATGTAATGCAGTTTTTGATACTTCGGGGGCATAATCGTCTAATTCCGCCTGGTGGACTTGCTGAGTTCCCAGATGCCATTTTGAATGCGAAACGCCTTGACCTGTTCAACTTGTATAGGGAGGTGGTTTCAAGAGGAGGCTTTCATGTTGGAAATGGTATCAATTGGAAAGGGCAAGTTTTCTCAAAGATGCGCAATCACACTATGACAAATAGAATGACAGGTGTTGGCAATACACTCAAAAGACATTATGAAACTTATCTCTTAGAATATGAATTATCTCATGATGACGTAGATGGAGAGTGCTGCTTGATGTGTCACAGTAGCGCAGCAGGTGACTGGGTGAACTGCGGCATATGTGGTGAATGGGCTCATTTTGGCTGTGATAGGCGGCAGGGACTTGGAGCATTTAAGGACTATGCTAAAACCGATGGGCTGGAGTACGTTTGTCCCCGCTGCAGTGCGTTAAAATTCAGCAAAAAATCCCAAAAAACTGCAAATGGTTTTTAA 2310 0.4255 MTTTINLLSFSLTPLFYFLWVLLYQKGVSRHCSLLAVLSGKSRDIKQKQKQGNASEDQFPYPFPELSSSGRLEVKVLIEPTADELGLALEQLQPDFVYLQGQQLEDRGEIGPLGWEDFDLSVPEALCGLFSSKLPNTVYLETPKGEKLAEALRSKGVPYTIYWKNDFSKYAASHFRHSLFSVAQSHTWDAFQLALASFRLYCIHNNVLPSNCHKGAGKLGPQILGVPPNIDVSPCVADMKEEEEDSPETISAVKIYDDDVNMRFLICGVPCTLDACLLGSLEDGLNALLFAEIRGCKLHNRTSATPPPLQAGTFSRGVVTMRCDISTCSSAHISLLVSGSADTCFNDQLLENHIKKELIEKSQLVQAFPNHEQSKAPSSEPRRSASVACGSSVFEVCMQVPAWASQVLRQLAPNLSYRSLVMLGIASIQGLPVASFNKDDAERLLFFCTRQEKENCPNDHVFSGIPSWLKPPSTSRKRSEPCSSSKSINDSGRGVEAIGSHRQKFNLASMRPIPHSNRHKILPFSGLSEGTRYDGDHGKSNLPLAPIKHNVSGPTSVTNRKSVSNSFQAHQIISLNPLPMKKHGCDRAPIRACSEEEFLRDVMQFLILRGHNRLIPPGGLAEFPDAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTMTNRMTGVGNTLKRHYETYLLEYELSHDDVDGECCLMCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPRCSALKFSKKSQKTANGF* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0631 769 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 1 769 IPR042293 -
Gso9g0631 769 MobiDBLite consensus disorder prediction 468 491 - -
Gso9g0631 769 CDD PHD_ARID4_like 702 753 - -
Gso9g0631 769 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 693 761 IPR013083 -
Gso9g0631 769 SUPERFAMILY ARID-like 593 707 IPR036431 GO:0003677
Gso9g0631 769 PANTHER ARID/BRIGHT DNA-BINDING DOMAIN PROTEIN 1 769 - -
Gso9g0631 769 SUPERFAMILY FYVE/PHD zinc finger 693 758 IPR011011 -
Gso9g0631 769 Gene3D - 589 692 IPR036431 GO:0003677
Gso9g0631 769 SMART ARID_2 589 692 - -
Gso9g0631 769 MobiDBLite consensus disorder prediction 467 495 - -
Gso9g0631 769 Pfam ARID/BRIGHT DNA binding domain 595 692 IPR001606 GO:0003677
Gso9g0631 769 CDD ARID 594 692 - -
Gso9g0631 769 ProSiteProfiles ARID domain profile. 592 696 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0631 Gso-Chr9 7850439 7858672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0631 22 768 ARID Transcription Factor Family AT3G43240 66.003 0.0 989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Gso9g0631 ARID 7.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0631 - - gsj:114367749 1574.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1516 15 18202274 18210674 Gso9g0631 9 7850439 7858672 GST