Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0622 ATGGATAGCGATGGAGGCTCCAAATTGAATGGGATTAGGCAGATTGTGAAGCTAAAGGAAATGCTCCAGAAGTGGCAAAGTGTGACATTAGGCACCAAACCTTCCAATTCCCTTTCTGATCATGTGACTAATGATGATGGGAGCATATCACCATTGATCAACAAAAGTGTATTGAATGTGATGAATTGCGAATCAGACAATGAGGACAGTTGCCAAAGCCCTGCAGAACCGCTTCCACCACCTGATGTTCCGAAAGGGTACTTGGCAGTGTATGTTGGACCTGAGCTTAGGAGGTTCATCATCCCCACCAGTTACCTTAGCCACCCTCTCTTCAAAGTTTTGCTGGAAAAGGCTGCAGACGAATTCGGGTTTGATCAGAGTGGTGGCCTCACCATCCCATGTGAGATTGAGACCTTCAAGTACCTTCTCAAGTGCATGGAGAATGAGCAGAAAGAGCAACTCGGTGACAGCGCCCGTAAGTTATTTGCATTAATCTGGAAGCTCAGGGTCTGTCGAAGAGTAAGTAGTTATTCCCATATTTCTGGGCGACCAAAATCATAG 561 0.4599 MDSDGGSKLNGIRQIVKLKEMLQKWQSVTLGTKPSNSLSDHVTNDDGSISPLINKSVLNVMNCESDNEDSCQSPAEPLPPPDVPKGYLAVYVGPELRRFIIPTSYLSHPLFKVLLEKAADEFGFDQSGGLTIPCEIETFKYLLKCMENEQKEQLGDSARKLFALIWKLRVCRRVSSYSHISGRPKS* 187
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0622 186 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 162 IPR003676 GO:0009733
Gso9g0622 186 Pfam Auxin responsive protein 78 145 IPR003676 GO:0009733
Gso9g0622 186 PANTHER SMALL AUXIN-UP RNA-RELATED 7 162 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso9g0622 Gso-Chr9 7615576 7618591 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0622 1 152 Calmodulin-binding Proteins AT3G43120 64.474 2.81e-68 203
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0622 K14488 - gmx:100819193 330.487
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1502 15 17916713 17921151 Gso9g0622 9 7615576 7618591 GST
Gso13g0834 13 22640458 22642462 Gso9g0622 9 7615576 7618591 PCT
Gso17g0380 17 3473654 3475741 Gso9g0622 9 7615576 7618591 PCT
Gso9g0622 9 7615576 7618591 Gso13g0834 13 22640458 22642462 PCT
Gso9g0622 9 7615576 7618591 Gso17g0380 17 3473654 3475741 PCT