Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0614 ATGCAACTCCAACTCACACTCTCCAGTCTCTTCCTCTCCCTTTTGTTAACAATAACATTAACATCTCCAACCTTGGCAGCACAAAGCAAGCCGCAGGATCTGGTCCGGTCCTCGTGCGTGCACGCGCGGTACCCGCGTCTGTGCCTGCACACCCTCTCCAACTATCCGGGCTCCGCCAACACGCCATTAGACGTGGCCCGGACAGCGCTGAAGGTGAGCCTAGCGCACACACGCCGGGCCTCCAAGTTCCTGCACGCGCTTTCTCATGACGATTCAATCATCATGAGAAAGCGTGAGCGCTCCGCGCTGCGAGACTGCACGGAGCAGATCTCGGACTCTATTGATCAGCTTCGGCGGAGTCTCGACGAGCTGCAGCATCTCCGCTCGGAGACATTCCGGTGGCAGATGAGCAACGCCCTGACGTGGGTCAGCGCCGCCCTCACCGATGGCGACACCTGCCTCGAAGGCTTCGGAGGGAATGCCAGGCCCGACGTCAAACGGAGAGTCACGGATGTTGCGAGGGTCACTAGCAATGCTTTGTATATGATTAATCGGCTGGGTCAAAGTAGGACCGGAAAGCCCAAGTACAAGCCCAGGCCCAGGACTCAGCCTGGCTCTGCCTCAAGTACTGAAAAATTGAATTAG 645 0.5767 MQLQLTLSSLFLSLLLTITLTSPTLAAQSKPQDLVRSSCVHARYPRLCLHTLSNYPGSANTPLDVARTALKVSLAHTRRASKFLHALSHDDSIIMRKRERSALRDCTEQISDSIDQLRRSLDELQHLRSETFRWQMSNALTWVSAALTDGDTCLEGFGGNARPDVKRRVTDVARVTSNALYMINRLGQSRTGKPKYKPRPRTQPGSASSTEKLN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0614 214 Pfam Plant invertase/pectin methylesterase inhibitor 33 181 IPR006501 GO:0004857
Gso9g0614 214 CDD PMEI-like_3 37 186 - -
Gso9g0614 214 PANTHER PECTINESTERASE INHIBITOR 3 8 191 - -
Gso9g0614 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 191 - -
Gso9g0614 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 186 IPR035513 -
Gso9g0614 214 SMART PMEI_2 30 182 IPR006501 GO:0004857
Gso9g0614 214 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 186 IPR006501 GO:0004857
Gso9g0614 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 187 IPR035513 -
Gso9g0614 214 Coils Coil 107 127 - -
Gso9g0614 214 MobiDBLite consensus disorder prediction 186 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0614 Gso-Chr9 7511533 7512749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0614 16 194 Carbohydrate Esterase AT3G49220 31.579 1.68e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0614 - - gmx:100780565 396.741