Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0612 ATGGAACTGAAATTCGTTCTCTTTCTACTCCCTTTGCTAGTTGTTGCTGCTCATGGACTCGCTTCCAATGCGACACTGAACGAGACTTGTGGATACTTCGATGGTTCTCTCAATAGGGACCCTAAAGTACCTTGCCCGATTGGTTGGGTTATGGACCCGAACAAAACCAAGTGCTTTCTCCATGTTGGGAGGCCCCAATCTTGGAATGACTCAGAGACCTGTTGTAGTAAGTATGGTGGACATTTAGTGTCATTGACATCGCTTCAGGAGCTACAATTTGCTCAAAGCCTATGTGGTGAATCTATAAATAGTTGCTGGATTGGTGGGCAAAGACTCAACTCTACAGCTGGTTATCAGTGGATGTGGTCTAACAATTCACCGTGGAACAACTCCATATTTTCTATGGTCAATGTTCCACCCCATTGTAATGGAACTGGACCGTCCTGTCATAGGAACAGTACAGACAATTTGTGTACAGTAGTGACTAATAATTCAAACTCTCTCATAACTGAGAGATGCGACAATCCTCATGCTTCTCTATGTATACTTGATATAGATACAAAACGGAACCAAATGCACCGTCGCAGAGAATACCTTATCATCCTCACAGTGGTGAGTACCTTGATACTCTCCACAACATTATCAGTGGTAGTTTGGCTTCTTGTATATAAGCGAGGCAAGAAAAGAAGGCGGTCTAGAAAACTATCTATTCCAGGAGCTTCTCTTCCATCATGGAAAGTCTTTACCAAAGAGGAATTAAGGTCAATTACAAAGAATTTCAGTGAAGGTAACCGTCTTGTTGGGGATGCCAAGACTGGTGGTACATACAGTGGGGTTTTATCAGATGGTTCAAAAGTCGCAGTTAAGAGATTAAAGAGGTCAAGCTTTCAGAGGAAAAAGGAGTTCTATTCTGAAATTAGCAGGGTTGCTCGGCTTCGTCATCCTAATCTGGTGGCTGTGATGGGATGCTGCTATGATCATGGTGACCGCTACATTGTTTATGAGTTTGTAGCTAATGGGCCCTTAGATAAATGGCTACATCATATACCAAGGGGAGGTCGCAACTTAGATTGGGCTATGAGGATGAAAATTGCAACTACGCTTGCTCAAGGAATTGCGTTTCTGCACGACAAGGTTAAGCCACAAGTTGTGCATCGAGATATACGTGCTAGCAATGTTCTGCTGGATGAGGAGTTTGGAGCACAGCTTATGGGTGTTGGTCTGTCCAAGTTTGTGCCATATGAGGTAATGCACGAGAGGACTGTGATGGCAGGTGGAACTTATGGATATCTTGCCCCGGAGTTTGTGTACAGAAATGAGCTCACAACAAAGAGTGATGTGTATAGTTTTGGTGTGCTACTACTTGAAATTGTAAGTGGACGTAGACCTGCACAGGCAGTGGATTCTGTGGGTTGGCAGAGTATATTTGAATGGGCGACGCCTCTTGTGCAAGCTCATCGCTATCACGAACTCTTGGATCTTCATATAACTTCCTCCTCTATCATCCCAGAGGCTAGTACCATCCAAAAGGTTGTAGACCTTGTTTATTCTTGCACGCAGCATGTCCCGTCTATGCGCCCTAGAATGTCTCATGTTGTTCACCAGCTGCAACAGATTGCCCAGCCACCTGCAAAGTAA 1638 0.4426 MELKFVLFLLPLLVVAAHGLASNATLNETCGYFDGSLNRDPKVPCPIGWVMDPNKTKCFLHVGRPQSWNDSETCCSKYGGHLVSLTSLQELQFAQSLCGESINSCWIGGQRLNSTAGYQWMWSNNSPWNNSIFSMVNVPPHCNGTGPSCHRNSTDNLCTVVTNNSNSLITERCDNPHASLCILDIDTKRNQMHRRREYLIILTVVSTLILSTTLSVVVWLLVYKRGKKRRRSRKLSIPGASLPSWKVFTKEELRSITKNFSEGNRLVGDAKTGGTYSGVLSDGSKVAVKRLKRSSFQRKKEFYSEISRVARLRHPNLVAVMGCCYDHGDRYIVYEFVANGPLDKWLHHIPRGGRNLDWAMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGAQLMGVGLSKFVPYEVMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYHELLDLHITSSSIIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQIAQPPAK* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0612 545 ProSiteProfiles Protein kinase domain profile. 261 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0612 545 CDD CLECT 57 181 - -
Gso9g0612 545 SUPERFAMILY Protein kinase-like (PK-like) 234 537 IPR011009 -
Gso9g0612 545 Gene3D - 41 199 IPR016186 -
Gso9g0612 545 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 7 541 - -
Gso9g0612 545 Pfam Protein tyrosine and serine/threonine kinase 268 536 IPR001245 GO:0004672|GO:0006468
Gso9g0612 545 SMART tyrkin_6 273 536 IPR020635 GO:0004713|GO:0006468
Gso9g0612 545 SMART CLECT_2 45 182 IPR001304 -
Gso9g0612 545 Pfam Lectin C-type domain 65 181 IPR001304 -
Gso9g0612 545 Gene3D Phosphorylase Kinase; domain 1 239 336 - -
Gso9g0612 545 PANTHER - 7 541 - -
Gso9g0612 545 ProSitePatterns Tyrosine protein kinases specific active-site signature. 383 395 IPR008266 GO:0004672|GO:0006468
Gso9g0612 545 Gene3D Transferase(Phosphotransferase) domain 1 337 544 - -
Gso9g0612 545 SUPERFAMILY C-type lectin-like 40 182 IPR016187 -
Gso9g0612 545 ProSiteProfiles C-type lectin domain profile. 54 182 IPR001304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0612 Gso-Chr9 7429293 7434962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0612 75 542 Receptor kinase-like Gene Family AT1G52310 70.650 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Gso9g0612 PK_Tyr_Ser-Thr 3.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0612 - - gmx:100779497 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1494 15 17614038 17619625 Gso9g0612 9 7429293 7434962 GST