Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0604 ATGTCGAGTTCATCGGAATACTCTCAATTTTCCGGCCAGAAACCGGCGAGGTCGCCGGAGAAATCGAGCTTCTCTCAGACTTGTAGCCTGTTGAGTCAATACATCAAGGAGAAGGGTAGCTTCGGAGATCTTACCCTCGGAATGACATCATGTGGGTCACCTGAGACATCTTGTCAATCTGCTACAACCATGAACTTGTTTCCTACCAAGGAAAACAACGTGACACCAAAGGACCTGACAGCTATGGATTTGTTCTCTCCACAAGCTTCCTCCTATCGTCCTTCAGAGGAGATTCCAACCTTGATTAATTCCAGTGCAATTAAATCTGTGAGCAAGAGTGCTAAAACTGCACAGATGACAATCTTTTATGGTGGACAAGTTGTTGTCTTTGATGATTTTCCTGCTGACAAAGCAAGTGAGATCATGTCCTATGCCACCAAAGGGATCCCCCAAAGCCAGAACAATTCTGTTTTCACCTACACACCGAGCCAGCCTTCATTTCCTGCTAATTTGGTCAGAACTTCAGCTGATTCAAGTGCTCCAATTATTCCTAGTGTGAACATTACCAACTCCATTCATGAACACCCTCAAGCATCATCCAGACCTGTTGTTTGTGATCTGCCAATTGCTAGAAAAGCTTCACTCCACCGGTTTCTGGAGAAGAGAAAGGATAGAATTGCTTCCAAAGCACCATATCAACTAGCAAATGGGTCTTCTAACCAGCCAGCTGAGTCCATGCCATGGCTTGGGCTGAGTGCTTCTTCACCTCGAATCTGA 777 0.4543 MSSSSEYSQFSGQKPARSPEKSSFSQTCSLLSQYIKEKGSFGDLTLGMTSCGSPETSCQSATTMNLFPTKENNVTPKDLTAMDLFSPQASSYRPSEEIPTLINSSAIKSVSKSAKTAQMTIFYGGQVVVFDDFPADKASEIMSYATKGIPQSQNNSVFTYTPSQPSFPANLVRTSADSSAPIIPSVNITNSIHEHPQASSRPVVCDLPIARKASLHRFLEKRKDRIASKAPYQLANGSSNQPAESMPWLGLSASSPRI* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0604 258 Pfam tify domain 114 145 IPR010399 -
Gso9g0604 258 PANTHER PROTEIN TIFY 10A 17 252 - -
Gso9g0604 258 ProSiteProfiles Tify domain profile. 112 147 IPR010399 -
Gso9g0604 258 Pfam Jas motif 208 233 IPR018467 -
Gso9g0604 258 MobiDBLite consensus disorder prediction 232 248 - -
Gso9g0604 258 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 252 IPR040390 -
Gso9g0604 258 SMART tify_2 112 147 IPR010399 -
Gso9g0604 258 MobiDBLite consensus disorder prediction 230 258 - -
Gso9g0604 258 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0604 Gso-Chr9 7245028 7247729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0604 1 253 Tify Gene Family AT1G19180 43.446 8.39e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gso9g0604 tify 5.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0604 K13464 - gmx:100801449 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1487 15 17346605 17349223 Gso9g0604 9 7245028 7247729 GST
Gso13g0818 13 22492284 22494651 Gso9g0604 9 7245028 7247729 PCT
Gso17g0394 17 3619996 3622297 Gso9g0604 9 7245028 7247729 PCT
Gso9g0604 9 7245028 7247729 Gso13g0818 13 22492284 22494651 PCT
Gso9g0604 9 7245028 7247729 Gso17g0394 17 3619996 3622297 PCT