Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0600 ATGGAGATGGAGAAGACGGGCGCAGGAGTAGCAGTGTTGTCGGCGAAGGAGGCATTCGAGAAGCTTGAGAAGGTCGGAGAAGGGACATACGGGAAGGTGTACAGGGCACGAGAGAAGGCCACCGGAAAGATCGTTGCTCTCAAGAAGACTCGCCTCCACGAGGACCAAGAAGGCGTCCCTCCCACCACTCTCCGCGAGGTTTCCATCTTGCGAATGCTCTCTCGCGATCCCCATGTCGTTAGGTTAATGGATGTGAAGCAAGGCCAGAACAAGGAAGGGAAGACAGTGCTCTACTTGGTGTTTGAGTACATGGACACCGATCTCAAGAAATTCATTCGCTCTTTCCGCCAAACCGGACAAAGCATTCCACCCCAAACTATCAAATGCTTGATGTATCAGCTTTGCAAGGGGATTGCTTTCTGCCACGGTCATGGGATCTTGCACAGGGACTTGAAGCCTCACAATCTGTTGATGGACCGGAAAACAATGATGCTTAAAATTGCTGATCTTGGACTCGCTCGGGCATTTACTGTGCCAATTAAGAAATATACACACGAGATATTAACCCTGTGGTATAGAGCTCCTGAAGTCCTCTTGGGTGCTACCCATTACTCAATGGCAGTGGACATATGGTCCGTTGGCTGCATATTTGCCGAACTTGTCACCAAACAAGCTCTCTTTGCTGGTGATTCCGAGCTGCAACAACTCCTGCATATATTCAGGCTATTAGGTACTCCAAATGAAGAGGTGTGGCCAGGGGTGAGTAAACTAAAGGACTGGCATGAATACCCCCAATGGAACCCTAAAAGTCTGTCAACGGCTGTTCCAGGTTTGGATGAGCTTGGACTTGATTTGCTATCCCAAATGTTGAAATATGAACCTTCCAAGAGGATTTCTGCAAAGAAAGCAATGGAACATGCTTACTTCAATGACCTGGACAAGGGGCATCTTTAG 954 0.4853 MEMEKTGAGVAVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDQEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGQSIPPQTIKCLMYQLCKGIAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVGCIFAELVTKQALFAGDSELQQLLHIFRLLGTPNEEVWPGVSKLKDWHEYPQWNPKSLSTAVPGLDELGLDLLSQMLKYEPSKRISAKKAMEHAYFNDLDKGHL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0600 317 PANTHER - 13 315 - -
Gso9g0600 317 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Gso9g0600 317 SMART serkin_6 19 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0600 317 ProSiteProfiles Protein kinase domain profile. 19 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0600 317 PANTHER CELL DIVISION PROTEIN KINASE 13 315 - -
Gso9g0600 317 Pfam Protein kinase domain 19 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0600 317 SUPERFAMILY Protein kinase-like (PK-like) 16 312 IPR011009 -
Gso9g0600 317 Gene3D Transferase(Phosphotransferase) domain 1 107 316 - -
Gso9g0600 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Gso9g0600 317 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0600 Gso-Chr9 7168765 7170602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0600 3 317 Core Cell Cycle Gene Families AT1G20930 86.709 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Gso9g0600 Pkinase 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0600 K07760 - gmx:100799839 638.262