Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0596 ATGGCATTTGAGTCCAACGAAGTTGCAGCCACAACGCTCCAAGCCATATGCTACAAGCGCGGTTCCCTCCAGCTTCTCGATCAGAGAAAGCTCCCTCTGGAGACAGTTTACTTGGAAATTCGGGATTCAACGGATGGCTGGAATGCCATACGGGAAATGGTGGTCCGGGGAGCACCTGCTATTGCAATTGCAGCGGCACTCTCTTTGGCTGTGGAGGTGTTCAATTTAGATTTTAATGGGTCAGCTACTGATGCTGTATCCTTGCTGCAGAAGAAATTAGAATATCTTGTCACAAGTCGGCCAACTGCAGTGAACCTATCAGATGCTGCGACAAAACTCAAAGAAGTGATATCAAATGCTGCTGCTACCACTTCAGAGGGAAGGAGTGTTTTCCAAGTGTATATAGATGCTGCTGAAGTTATGCTTGAGGATGATGTTGCGTCAAATAGAGCTATTGGTTCTTATGGAGCTAGTATTATTCAACAACAAACAGAGAAACAAAAGCTTTCTGTTTTGACTCATTGCAACACTGGAAGTCTAGCCACAGCTGGATATGGTACTGCTCTGGGTGTCATCCGTGCACTTCATAGTGCCGGAGTTCTAAAAAGGGCTTATTGCACAGAAACACGCCCATTTAATCAAGGATCTAGACTTACTGCCTTTGAGTTGGTGCATGAAAAAATACCAGGAACTCTTATTGCCGATTCTGCTGCAGCTGCATTAATGAAGGCAGGACATGTGGATGCTGTTGTTGTTGGGGCAGATCGGGTTGCATCAAATGGTGACACAGCCAACAAAATTGGAACCTACAGCGTTGCCTTGTCCGCTAAGTTTCATAATGTACCTTTTTATGTGGCTGCACCCCTAACTTCCATTGATCTATCACTTTCTTCTGGACAAGAAATTGTCATTGAGGAGAGGTCTCCCAAGGAATTGCTGAACACACATGGAGGACTTGGAGAGCAGATTGCTGCCTCAGGAATTTCTGTGTGGAACCCAGCTTTTGATGTTACTCCTGCTAATCTAATATCGGGGATCATCACTGAGAAGGGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCCTTCGTACAGAAAACAGGTTAA 1119 0.4513 MAFESNEVAATTLQAICYKRGSLQLLDQRKLPLETVYLEIRDSTDGWNAIREMVVRGAPAIAIAAALSLAVEVFNLDFNGSATDAVSLLQKKLEYLVTSRPTAVNLSDAATKLKEVISNAAATTSEGRSVFQVYIDAAEVMLEDDVASNRAIGSYGASIIQQQTEKQKLSVLTHCNTGSLATAGYGTALGVIRALHSAGVLKRAYCTETRPFNQGSRLTAFELVHEKIPGTLIADSAAAALMKAGHVDAVVVGADRVASNGDTANKIGTYSVALSAKFHNVPFYVAAPLTSIDLSLSSGQEIVIEERSPKELLNTHGGLGEQIAASGISVWNPAFDVTPANLISGIITEKGVITKTSAGDAFDIKAFVQKTG* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0596 372 Pfam Initiation factor 2 subunit family 55 354 IPR000649 GO:0044237
Gso9g0596 372 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 13 364 IPR005251 -
Gso9g0596 372 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 41 355 IPR011559 GO:0044249
Gso9g0596 372 Gene3D - 203 367 IPR042529 -
Gso9g0596 372 Gene3D - 11 202 IPR027363 -
Gso9g0596 372 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 11 369 - -
Gso9g0596 372 SUPERFAMILY NagB/RpiA/CoA transferase-like 10 357 IPR037171 -
Gso9g0596 372 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 14 355 IPR005251 -
Gso9g0596 372 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 11 369 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0596 52 370 Eukaryotic Initiation Factors Gene Family AT2G05830 77.570 2.58e-172 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0596 K08963 - gmx:100799311 687.182