Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0595 ATGCAGAAGTCGGCATTGCCACTGAGCGACGCGAATGCGAACAAGAAGAGGAAGGAATTGCGCAGCAAGGAAACGTTGGTGAAGCTTCTGAGATGGCATTTTGGGTACCCCGATTTCAGGGACATGCAATTGGACGCTATTCAAGCTGTGCTCTCAGGGAAAGATTGTTTTTGTCTTATGCCAACTGGAGGAGGCAAGTCGATGTGTTATCAGATCCCTGCATTGGCAAAAGCAGGCATTGTGCTTGTCGTTTGCCCTTTAATAGCCTTAATGGAAAACCAAGTAATGGCACTAAAGGAGAAAGGCATAGCGGCAGAATTTCTCTCCTCAACGAAAACAACAGATGCAAAAGTAAAGATTCATGAGGACCTTGATTCTGGAAAACCTTCTACGAGGCTGCTATATGTGACTCCAGAGTTGATAACAACACCAGGGTTTATGACTAAGCTGACAAAGATTTATACCAGGGGGTTGCTAAATCTGATTGCGATAGATGAGGCGCATTGCATCTCATCTTGGGGTCATGATTTCAGACCTAGCTACCGTAAGCTATCCTCTTTGAGAAGCCACCTACCAGATGTACCAATATTAGCTTTGACTGCTACTGCTGTGCCTAAGGTTCAGAAGGATGTAGTTGAATCCTTGCAGATGCAAAATCCATTAATGCTCAAGTCTTCATTTAATCGTCCTAATATATATTATGAAGTTAGATACAAAGATCTGTTGGATGATGCTTATGCTGATTTATCTAATACACTCAAATCTCTGGGAGATGTCTGTGCAATAGTGTACTGCCTTGAACGTTCAATGTGTGATGACTTGTCAACTAATCTATCCCAAAATGGCATTTCATGTGCTGGATTGAATAATAAAATGCGAACTTCGGTGTTGGATGATTGGATATCTTCCAAGATAAAAGTTGTTGTTGCTACTGTTGCTTTTGGAATGGGCATTGATAGAAAGGATGTCAGAATTGTATGCCACTTCAACATTCCCAAGTCAATGGAAGCATTCTATCAAGAGTCAGGCAGAGCTGGTCGTGATCAATTGCCATCTAGAAGTCTGCTGTACTATGGGGTAGATGATCGCAAAAGAATGGAATTTATATTACGTAAATCAGTGAGCAAGAAGTCACAGTCATCTAGTTCACAAGAAGAATCATCCAAAATGTCCCTGATTGCTTTCAATCTGATGGTTGAATATTGTGAAGGGTCTGGATGTCGCAGGAAAAGGGTTCTCGAGAGTTTTGGGGAACAGGTAACTGCATCACTATGTGGAAAAACATGTGATGGCTGCAGACATCCAAACTTAGTTGCCCGATATTTGGAGGATCTCACAACTGCTTGTGCTCTACGCCAGAAAAATGGTTCTTCTCGAGTTTTTATGACCAGTTCCACTGATGCAATTAACGGAGAACAGTTATCTGAATTCTGGAATCAGGATGAGGAAGCTAGTGGATCAGAGGAAGATATATCTGATTCAGATGATGGTAATGAGGTTGTCAACAACCTAACCCGGTCAAAGCTTCAATCCAAATTGGGAGTGAGTGAAAAGCTTGCTATGTTACAACGGGCAGAAGAAAACTTCTATCGAAATAATAATGCTTACAAACAGAGCAACAAAGTTGACAAAAATGCTATTTCTGATCCAATGCGAGGATCAAGCAGGCAAAGGTTACAAAATGCTCTAAAACAGGTTCAGCAACGGCTTGACAACTTCAAGATTGAAATGGAAACATCAGCATCTTTCCTTGAAGAAGAATGCTACAAGAAATATGGCAAGGTTGGTAAATCATTCTATTATTCGCAAGTGGCAAGTACTGTAAGATGGCTGACAACTGCAAGTTCTAGCGAACTGATCAACCGACTTAGTGCAATTAATGCTTCTACCTCAATGAATGTCTTGTCTGAAGCTGAAAACCTCCTCATCCCAGCTAATCAGCCCCTCACACCAGCTGAACAGCCCCTCACATCGCCACCTGCTTTAGATCCTTATGCAAGAGATACCAGCAATGAACACTCAGGCACTGCTAGATCAGAAACTTCTGCATGTGTCTTGCCAATGGAAGGTTCTTTTAGTACCAATTTGCCACAGATACCATCCTTCTCTGAATTCGTAAATAGTAGGAAAGCAAAAGGGGACCAATTACATGACACCAAAAGGCATTCATCAAGAGTTGAAAAGAAGATGAGGATACAGTAG 2202 0.4173 MQKSALPLSDANANKKRKELRSKETLVKLLRWHFGYPDFRDMQLDAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKAGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTKTTDAKVKIHEDLDSGKPSTRLLYVTPELITTPGFMTKLTKIYTRGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRSHLPDVPILALTATAVPKVQKDVVESLQMQNPLMLKSSFNRPNIYYEVRYKDLLDDAYADLSNTLKSLGDVCAIVYCLERSMCDDLSTNLSQNGISCAGLNNKMRTSVLDDWISSKIKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGVDDRKRMEFILRKSVSKKSQSSSSQEESSKMSLIAFNLMVEYCEGSGCRRKRVLESFGEQVTASLCGKTCDGCRHPNLVARYLEDLTTACALRQKNGSSRVFMTSSTDAINGEQLSEFWNQDEEASGSEEDISDSDDGNEVVNNLTRSKLQSKLGVSEKLAMLQRAEENFYRNNNAYKQSNKVDKNAISDPMRGSSRQRLQNALKQVQQRLDNFKIEMETSASFLEEECYKKYGKVGKSFYYSQVASTVRWLTTASSSELINRLSAINASTSMNVLSEAENLLIPANQPLTPAEQPLTSPPALDPYARDTSNEHSGTARSETSACVLPMEGSFSTNLPQIPSFSEFVNSRKAKGDQLHDTKRHSSRVEKKMRIQ* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0595 733 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 3 717 - -
Gso9g0595 733 Coils Coil 556 576 - -
Gso9g0595 733 CDD DEXHc_RecQ 28 228 - -
Gso9g0595 733 MobiDBLite consensus disorder prediction 710 733 - -
Gso9g0595 733 Gene3D - 229 451 IPR027417 -
Gso9g0595 733 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 252 389 IPR001650 -
Gso9g0595 733 MobiDBLite consensus disorder prediction 482 496 - -
Gso9g0595 733 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 47 221 IPR014001 -
Gso9g0595 733 Pfam Helicase conserved C-terminal domain 253 347 IPR001650 -
Gso9g0595 733 MobiDBLite consensus disorder prediction 648 681 - -
Gso9g0595 733 Pfam RecQ zinc-binding 362 433 IPR032284 -
Gso9g0595 733 Pfam DEAD/DEAH box helicase 41 208 IPR011545 GO:0003676|GO:0005524
Gso9g0595 733 CDD SF2_C_RecQ 229 358 - -
Gso9g0595 733 Gene3D - 2 228 IPR027417 -
Gso9g0595 733 MobiDBLite consensus disorder prediction 705 733 - -
Gso9g0595 733 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 29 438 IPR004589 GO:0004386|GO:0006310
Gso9g0595 733 PANTHER DNA HELICASE RECQ FAMILY MEMBER 3 717 - -
Gso9g0595 733 SMART helicmild6 272 349 IPR001650 -
Gso9g0595 733 MobiDBLite consensus disorder prediction 480 499 - -
Gso9g0595 733 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 361 IPR027417 -
Gso9g0595 733 SMART ultradead3 35 237 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0595 Gso-Chr9 7080699 7094682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0595 32 347 Eukaryotic Initiation Factors Gene Family AT3G19760 21.114 3.99e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0595 - K10901 gmx:100819601 1394.41