Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0588 ATGACCCTTATGAAAATCCTATGGAAATCACTCTTCCCCGGTTGTTACAAGGGTGAATATCCCTCTCCAAAGCCAAAGAAAGTGGTGGCTACAAAGCCAAATTCTTCACACAGGATTTCTGTGACGGATTTGAGTTATCCAAGCACGACTCTTTCGGAGGATCTCTCTATTTCTCTAGCGGGGACCAACCTCCATGTTTTCTCAATCGCTGAGCTCAAGATTATCACTCAACAATTCTCTTCTAGCAATTTTCTTGGAGAAGGTGGGTTCGGACCGGTTCATAAGGGGTTCATTGATGACAAGCTTAGGCATGGCCTCAAGGCTCAACCCGTGGCTGTTAAGCTCTTGAACTTGGATGGCTCGCAGGGCCACAAAGAGTGGTTGACTGAGGTTGTTTTTCTGGGGCAACTTAGGCATCCACATCTCGTGAAGCTGATAGGATACTGTTGTGAAGAAGAACACAGGGTTTTGGTGTATGAATATTTACCAAGAGGAAGCTTGGAGAATCAATTATTTAGAAGATTCTCAGCATCACTTCCATGGTCAACGAGAATGAAAATTGCTGTTGGAGCTGCGAAGGGCCTAGCCTTTCTTCATGAGGCTGAGAAGCCAGTCATCTATAGAGATTTCAAAGCTTCCAACATCTTGTTAGACTCTGATTACAATGCAAAGTTATCTGATTTTGGGTTGGCAAAAGACGGTCCCGAAGGAGATGACACCCACGTTTCAACCCGAGTTATGGGTACACACGGCTACGCAGCTCCAGAATATGTCATGACAGGTCACTTGACAGCAATGAGTGATGTGTATAGTTTTGGAGTAGTGCTATTGGAGCTGTTAACAGGAAGAAGGTCAGTGGACAAAAACCGGCCTCCAAGGGAGCAAAACCTAGTGGAGTGGGCAAGGCCAATGCTAAACGATTCAAGGAAACTCAGCAGAATAATGGATCCTAGACTTGAAGGCCAATATTCAGAAATGGGAACAAAAAAAGCAGCAGCATTGGCATACCAATGCCTCAGCCACAGGCCAAGGAGCAGACCCTCAATGAGCACAGTGGTCAAGACCCTTGAGCCACTTCAAGATTTTGATGACATTCCAATTGGAACATTTGTGTACACAGCTCCACCAGATAATAATAATGAAGTGCAGCATAAGGATCAATGTGAGACACCTAAGAGGAGGGAAAATAATAATAATGGTCACAATATTCATAGGAATGGCCACAGGCATCATCCACTTAAATCCCCCAAGGCCCCAAGGTCACAATCACAATCACAATCACAGTCACATTTACGTCCAAATGACCACAAACACAGAAATGGAAGAGGAAGTGGACCAAATTCTCCTCCATCACATGTGAAAATAATTAGGCCAGGAGTTATTGCTTGTTAG 1392 0.4447 MTLMKILWKSLFPGCYKGEYPSPKPKKVVATKPNSSHRISVTDLSYPSTTLSEDLSISLAGTNLHVFSIAELKIITQQFSSSNFLGEGGFGPVHKGFIDDKLRHGLKAQPVAVKLLNLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRVLVYEYLPRGSLENQLFRRFSASLPWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSVDKNRPPREQNLVEWARPMLNDSRKLSRIMDPRLEGQYSEMGTKKAAALAYQCLSHRPRSRPSMSTVVKTLEPLQDFDDIPIGTFVYTAPPDNNNEVQHKDQCETPKRRENNNNGHNIHRNGHRHHPLKSPKAPRSQSQSQSQSHLRPNDHKHRNGRGSGPNSPPSHVKIIRPGVIAC* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0588 463 MobiDBLite consensus disorder prediction 370 463 - -
Gso9g0588 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Gso9g0588 463 SUPERFAMILY Protein kinase-like (PK-like) 55 357 IPR011009 -
Gso9g0588 463 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Gso9g0588 463 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0588 463 PANTHER OS01G0588500 PROTEIN-RELATED 23 415 - -
Gso9g0588 463 Gene3D Phosphorylase Kinase; domain 1 41 161 - -
Gso9g0588 463 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Gso9g0588 463 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 23 415 - -
Gso9g0588 463 MobiDBLite consensus disorder prediction 382 402 - -
Gso9g0588 463 CDD STKc_IRAK 85 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0588 Gso-Chr9 7003812 7007518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0588 65 393 Glycoside Hydrolase AT3G07070 50.000 3.82e-103 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso9g0588 PK_Tyr_Ser-Thr 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0588 - - gmx:100797003 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1472 15 16983954 16987850 Gso9g0588 9 7003812 7007518 GST
Gso13g0806 13 22369947 22372448 Gso9g0588 9 7003812 7007518 PCT
Gso17g0404 17 3716408 3718971 Gso9g0588 9 7003812 7007518 PCT
Gso9g0588 9 7003812 7007518 Gso13g0806 13 22369947 22372448 PCT
Gso9g0588 9 7003812 7007518 Gso17g0404 17 3716408 3718971 PCT