Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0585 ATGCCTCCCATGTCCACGATTCCAATTCACAGACCTGAATTTTGTACCTTATTCTTCAATGGGTCTCCAAGCCCTTATAAATGCCCCAGAATTACTGCCTCATGGATCATGGCCATGGATTCGAAATTTTCTTCAACCATCAAGAATAATAGTGATAATGATTATAATCTGAAGAAGAAGAAGGATGAAGAACTCTCTGTGCAGATTTCAACCCCACCCATTTCCAAAGTTGAAACTTTAAACTCCAATGACCTCCAATTTGATCGATTGCAGCCATCGGATCAAGAATTGGGTCGAGTCAAAAGGTTTGAGTTTGGGCAATTTGTCGCACGAGAAACTGTGCTTGATGAAGAGTATTGGACAGCAGCATGGTTAAGGGCAGAAAGTCACTGGGAGGATCGACCATTCGAAAGATATGTTGATAACTACAAAAGGAAATTTGCGGAGCAGGAATTTAATGCATTAAAAAGGCGGTGCAAGGTGCAAAATGGTGATAGCTGCGCATGCATCATCACGGTGAGGAAGGAGCAGAAAAATGCAAAGCACTCAATATTAAAAAGTGTTGTAGGAACCCTTGATTTGAATATCCGATATTTGCTGCAAGGGGAGACTTATCCCGGGGAACGGGTAAAGGCCCCTCTTTTTTGCAGCATCAACAGAACACCACCAAGCAGATATGGCTACATTGCAAACTTATGCGTTATCAAATCAGCTAGGCGACAGGGAATTGCAAGTAACATGATGTCTTTTGCTATTGAAGCTGCAAAATCTAATGGTTTGACACAGGTGTATGTGCATGTAGACAGAAATAATAGGCCTGCACAGATATTGTACCAAAAGATGGGCTTTGAGATGGTTGAAATGGCAAACTCCCGGTTGGTAGAAGAAACATACTTACTACGTTTACAGACATAA 915 0.4164 MPPMSTIPIHRPEFCTLFFNGSPSPYKCPRITASWIMAMDSKFSSTIKNNSDNDYNLKKKKDEELSVQISTPPISKVETLNSNDLQFDRLQPSDQELGRVKRFEFGQFVARETVLDEEYWTAAWLRAESHWEDRPFERYVDNYKRKFAEQEFNALKRRCKVQNGDSCACIITVRKEQKNAKHSILKSVVGTLDLNIRYLLQGETYPGERVKAPLFCSINRTPPSRYGYIANLCVIKSARRQGIASNMMSFAIEAAKSNGLTQVYVHVDRNNRPAQILYQKMGFEMVEMANSRLVEETYLLRLQT* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0585 304 Pfam Acetyltransferase (GNAT) family 152 283 IPR000182 GO:0016407
Gso9g0585 304 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 215 304 IPR000182 GO:0016407
Gso9g0585 304 CDD NAT_SF 215 266 - -
Gso9g0585 304 Gene3D - 111 303 - -
Gso9g0585 304 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 303 - -
Gso9g0585 304 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 218 287 IPR016181 -
Gso9g0585 304 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0585 Gso-Chr9 6945830 6949222 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso9g0585 Acetyltransf_1 1.1e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0585 - - gmx:100795426 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1468 15 16923633 16933347 Gso9g0585 9 6945830 6949222 GST
Gso13g0800 13 22320832 22322854 Gso9g0585 9 6945830 6949222 PCT
Gso17g0411 17 3761612 3763758 Gso9g0585 9 6945830 6949222 PCT
Gso9g0585 9 6945830 6949222 Gso13g0800 13 22320832 22322854 PCT
Gso9g0585 9 6945830 6949222 Gso17g0411 17 3761612 3763758 PCT