Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0579 ATGATGAATGGAAGAAACAGGTTTCCCTTTACCCCATCACAGTGGCAAGAGCTTGAACACCAAGCTCTCATCTACAAGTACATGGCTTCAGGCATTTCCATTCCCCCTGATCTTCTCTTCACCATAAAAAGGAGCTATTTTGATTCCCCTCTCTCCTCAAGGCTTTTGCCTAACCAGCCACAACACTTTGGATGGAACTACCTTCAGATGGGTTTGGGAAGAAAAATAGACCCTGAGCCAGGTAGGTGTAGAAGAACTGATGGCAAGAAATGGAGATGCTCAAAAGAAGCATACCCAGATTCTAAGTACTGTGAGAGGCACATGCACAGAGGGAAGAATCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAACACCATCATCAACAATGACAACAACAAACACAAACTCAAATGCTTCTTCAACACAACAAGCAATCTCATCAATCACCAAAATTAATACTCTTTCACCTCTTGCTTCATCTGAGACTCACCAACACCACCCTCAACACTATGGCTCCTTTCTCTATCATCATCACCCTCCTTCAAGGTCCTCTGGCATTGGCTTGTCCTTTGAAGATAATAGGGCTCCCTTGTTTCTTGACACTGGCTCTTGCTCTCAGTCCAACACAGACTGCAGGAGTAGGTATGTTTATGGAGAGAAAGAGGAGGTGGATGAGCATGCTTTCTTCACAGAACCTTGTGGTGTTATGAAAAGCTTCTCTGCTTCCTCTATGGATGACTCATGGCAACTCACACCATTGACTATGAGTTCCTCATCTTCTTCTTCCAAACAGAGGAGTTCCTTTGGCTTGTCCAGTGATTACTCTTGCTTGCAACTTCAGAGCCACTCAAAGCAGCAGCAACAAGAGCATCATCAAGATCAGGGTTGCTACATGTTTGGTGGTGGTCAAGTTGTGAAAGAAGAACCTCAGAAAACGGTTCATCGCTTCTTTGATGAATGGCCCCACAAAGGAAGAGAAGGGTCTTGGCTTGATTTGGATGACAAATCTTCCACAACCCAACTTTCAATTTCCATCCCCACATGTTCTCATGATTTTCCAACTTTCAGTTCTAGAAACCACCACGATGGTTGA 1098 0.4408 MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRSYFDSPLSSRLLPNQPQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTTPSSTMTTTNTNSNASSTQQAISSITKINTLSPLASSETHQHHPQHYGSFLYHHHPPSRSSGIGLSFEDNRAPLFLDTGSCSQSNTDCRSRYVYGEKEEVDEHAFFTEPCGVMKSFSASSMDDSWQLTPLTMSSSSSSSKQRSSFGLSSDYSCLQLQSHSKQQQQEHHQDQGCYMFGGGQVVKEEPQKTVHRFFDEWPHKGREGSWLDLDDKSSTTQLSISIPTCSHDFPTFSSRNHHDG* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0579 365 PANTHER GROWTH-REGULATING FACTOR 5 4 341 - -
Gso9g0579 365 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso9g0579 365 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso9g0579 365 PANTHER - 4 341 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gso9g0579 365 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Gso9g0579 365 MobiDBLite consensus disorder prediction 124 144 - -
Gso9g0579 365 Pfam WRC 78 120 IPR014977 -
Gso9g0579 365 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0579 Gso-Chr9 6839345 6841746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0579 7 120 GRF Transcription Factor Family AT3G13960 71.053 1.95e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gso9g0579 WRC 7.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0579 - - gmx:100814271 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1461 15 16789373 16791828 Gso9g0579 9 6839345 6841746 GST
Gso13g0794 13 22266329 22269003 Gso9g0579 9 6839345 6841746 PCT
Gso17g0418 17 3815837 3818482 Gso9g0579 9 6839345 6841746 PCT
Gso9g0579 9 6839345 6841746 Gso13g0794 13 22266329 22269003 PCT
Gso9g0579 9 6839345 6841746 Gso17g0418 17 3815837 3818482 PCT