Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0574 ATGCTTACGTGCATAGCACGTCCGAAGAAACTCGTCGGCGACTCGGCAGCGAGCGAGGATCCGAGTTCGCGGGGAGTGAAGTCGCTGACGGGTCAGCTGAAGGAGATGGCGCTGAAGGCGTCGGGGGCGTACAAGCAGTGCGGCGGGCCGTGCGCGACGGCGCCGCCGAGTCGAGTGAGTCGCGGCGGCGGAACCGAGTTGGACTCGGAGTCGTCGTCGTCGTCTTCGTCTCGGCGGCGGTGGGGGAAGGAGCTGGAGGCACGGCTGAAGGGGATATCGAGCGGGGAGGGGACGCCGAGCTCGAGCGGGAGGAGGGTGGTGCTGCTGCTTGAAGACGAGGAAGAGCCGAAGGAGTGGGTGGCGCAGGTTGAGCCCGGCGTTTTGATCACCTTCGTGTCGCTTCCCCGTGGCGGGAACCATCTCAAACGGATACGATTCAGCCGTGAGATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAAGGTGATGGAACTTTACAATGTGCAAAGGCTTAATCGTCAAGCTTTCCCTCTTCCAACTCCGCCTAGATCTGAAGACGAGAGTTCAAAGCGTGAATCAATAGAAGATTTCCCAGTGACACCTCCACTGAGCAGGGAAAGGCCACCATGTAACTTATTCCGTGCAGGAGGAGGAGGGATGGGAATGGGGTACTCATCCTCAGATTCATTTGATCATCACTCAATGCAATCATCCCGGCATTACTATGACCCCAATGACGTTAACTCAACCCCAAAAGCTTCTTCCACCATTAGTGCTGCTGCCAAGACAGATATCTCATCATCAATGGATGTTGATGCTTCCATAAGAAGTAGCTCTTCTAGAGAAGCTGATCGCTCTGGGGACCTGTCAATCAGCAATGCCAGTGACCTTGACACTGAATGGGTTGAGCAGGATGAGCCTGGGGTTTACATCACCATCAGAGCTCTCCCAGGTGGCAAAAAGGAGCTCAGACGAGTCAGGTTCAGTCGAGAAAAGTTTGGTGAGATGCATGCTAGACTGTGGTGGGAAGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1080 0.5463 MLTCIARPKKLVGDSAASEDPSSRGVKSLTGQLKEMALKASGAYKQCGGPCATAPPSRVSRGGGTELDSESSSSSSSRRRWGKELEARLKGISSGEGTPSSSGRRVVLLLEDEEEPKEWVAQVEPGVLITFVSLPRGGNHLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPPRSEDESSKRESIEDFPVTPPLSRERPPCNLFRAGGGGMGMGYSSSDSFDHHSMQSSRHYYDPNDVNSTPKASSTISAAAKTDISSSMDVDASIRSSSSREADRSGDLSISNASDLDTEWVEQDEPGVYITIRALPGGKKELRRVRFSREKFGEMHARLWWEENRARIHEQYL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0574 359 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 359 - -
Gso9g0574 359 Pfam Transcription factor BRX N-terminal domain 26 48 IPR027988 -
Gso9g0574 359 MobiDBLite consensus disorder prediction 182 297 - -
Gso9g0574 359 MobiDBLite consensus disorder prediction 11 30 - -
Gso9g0574 359 ProSiteProfiles BRX domain profile. 117 172 IPR013591 -
Gso9g0574 359 MobiDBLite consensus disorder prediction 45 80 - -
Gso9g0574 359 Pfam Transcription factor regulating root and shoot growth via Pin3 117 171 IPR013591 -
Gso9g0574 359 Pfam Transcription factor regulating root and shoot growth via Pin3 304 358 IPR013591 -
Gso9g0574 359 ProSiteProfiles BRX domain profile. 304 359 IPR013591 -
Gso9g0574 359 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 359 IPR044532 -
Gso9g0574 359 MobiDBLite consensus disorder prediction 245 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0574 Gso-Chr9 6748564 6756123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0574 1 359 Major Intrinsic Protein MIP AT1G31880 43.490 3.54e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0574 - - gmx:100793326 678.322