Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0571 ATGGAAGAAGACAAAGGCGTGGCAGACAAGAAAGTGACAAAGAATGACGAGGTTGTTCTACGAATTTCAGACTCTGAAGAAGCCATGCATGCAGAGAAGGATCATAGAGATTCTAGAAGTTCCCTAGAAGCTGAAATCAGTTCCCTTTCTCCTCAGCACAGCACCCACATAGGTAAAGGGTTTACAGATTCACATGGTGAACTCACAGAGCTTGAGAATCTAAGAAACAAGGGTCAAGTTTCCTCAGAGTTGGTGACAACTACAAAGAGGTTGATGTGTCGGTCGGAATTTTCGAAGCCAAAGTCCAGATTGGTGGAGCCACCATGTCCAAAAGACGCAACCTTTGTTGTAGAAAAGGCTCAAATGACAAGTTCCAATTTATCTGCAAGGAATTCTTCCAACAAGAATGTTTCTGAAGCAACTATTGTTACCCCAAGAACCCCCTTGCTTGGGACTCCGCGGGAAGAAGATGATGATGATGAAGAAGTGTACAAGGCTGCACTTATTGAAATGACCAAGAGATCGGGTAAGAAGTATAGTGTACTGGGTTTTGTTGAGTGGTTTGCTTTTGTTTGCATAATGGGGTTTTTGATTGCAAGCTTGACAGATCATAAGTTGCAACATTGGGAAATTTGGGGTTTGGAACTGTGGAAATGGTGTGTGTTGGTGCTGGTTATACTATGTGGTAGATTGGTCACTGAGTGGTTTATCAATGTTTTGGTATTCTTGATTGAGAGGAACTTCTTGTTTAAGAAAAAAGTTTTGTATTTTGTTTATGGTGTGAAGAATAGTGTTCAGGGCTTTGTATGGTTAAGTTTGGTTCTTTTGACATGGGTTCTGCTTTTCCACCATGATGTGGAGACAGCCAGAAAGTTTACTAGGATTCTTAATTACATTACTAGGGCCCTTGCTTCTTGTCTTATTGGAGCAGCTATATGGTTAGCCAAAACATTTTTGATAAAGCTGTTAGCTTCAAATTTTCAATCTACGAGATTTTTTGATAGGGTCCAAGTATCAATCTTTCACCAATACATTCTGAGGACACTTTCAGGTCCTCCCTTGATGGATATGGCTGAAACAGTAGGCAACATGTCGAGTAGTGGTCGACTCAGTTTTAAGGCCATGATTAATAAGAATGAAGGGAAGGAAGAACAAGTCATTGATGTAGACAAGCTCAAGAAAATGAAACAAGAGAAAGTTTCTGCTTGGACTATGAAAGGGTTGATTAATGTGATAAGCAGTTCTGGGTTGTCTACCATTTCCTATACACCAGAGAGTGCCTTTGAAGATGAGAGTGACCAGAAAGACAATGAAATTACTAGCGAGTGGGAAGCAAAGGCAGCTGCTTATAGAATTTTCAGGAACGTAGCCAAGCCAGGAAACAAGTATATCGAGAAAGATGACCTCTTGCGATTCATGAAAATTGAAGAAGTGGAAAATGTTCTTCCACTATTTGAAGGGGCAGTTGAGACTGGAAGAATTAAGAGGAAGTCTCTGAAGAACTGGCTGGTGAAAGTCTACCTTGAACGCCGATCACTTGTACATTCACTAAATGATGCCAAAACTGCTGTTGATGACTTGAATATGCTTGCTTCTGTAATTGTGATTATTGTGATCACTGTTGTGTGGCTTCTTATTATGGGTTTCTTAAACACTCAAGTTCTTGTCTTTATTTCATCCCAGCTTTTACTTGTGGTCTTCATGTTTGGCAACACAGCCAAGGCTGTATTTGAAGCTATTATATTTGTTTTTGTGATACACCCGTTTGATATTGGTGATCGCTGTGTCGTTGATGGTGTTCAGATGGTTGTGGAAGAGATGAACATACTAACTACAGTCTTTCTGAGATATGATAATGAAAAGATTTTCTATCCAAATTCAGTTCTGGCAACCAAGCCAATCAGTAACTTCTACAGGAGTCCAGAAATGCAAGATTCAGTTGAATTTTCTGTTGATGTTTCTACTTCTATTGAAAGTATTGGAGCTTTAAAGGCGAAGTTAAAAGCATATTTGGAGAGTAAGCCTCAACACTGGTGCTCCAACCACAACGTATTGGTTAAGGATATTGAGAATGTAAATAAGATGAAAATGTGTCTAAATGTTACTCACACCATAAATTTTCAGAACTATAAGGAAAGGAACAGCCGAAGATCTGAATTAGTCCTGGAGTTAAAGAAAATTCTTGAAGATCTTAATATTAAATATCATCTTCTGCCACAAGAAGTTCATCTCAGTTATGTAAGGTCACAAGACTCAGCAGCACATACCTTTTGA 2274 0.3923 MEEDKGVADKKVTKNDEVVLRISDSEEAMHAEKDHRDSRSSLEAEISSLSPQHSTHIGKGFTDSHGELTELENLRNKGQVSSELVTTTKRLMCRSEFSKPKSRLVEPPCPKDATFVVEKAQMTSSNLSARNSSNKNVSEATIVTPRTPLLGTPREEDDDDEEVYKAALIEMTKRSGKKYSVLGFVEWFAFVCIMGFLIASLTDHKLQHWEIWGLELWKWCVLVLVILCGRLVTEWFINVLVFLIERNFLFKKKVLYFVYGVKNSVQGFVWLSLVLLTWVLLFHHDVETARKFTRILNYITRALASCLIGAAIWLAKTFLIKLLASNFQSTRFFDRVQVSIFHQYILRTLSGPPLMDMAETVGNMSSSGRLSFKAMINKNEGKEEQVIDVDKLKKMKQEKVSAWTMKGLINVISSSGLSTISYTPESAFEDESDQKDNEITSEWEAKAAAYRIFRNVAKPGNKYIEKDDLLRFMKIEEVENVLPLFEGAVETGRIKRKSLKNWLVKVYLERRSLVHSLNDAKTAVDDLNMLASVIVIIVITVVWLLIMGFLNTQVLVFISSQLLLVVFMFGNTAKAVFEAIIFVFVIHPFDIGDRCVVDGVQMVVEEMNILTTVFLRYDNEKIFYPNSVLATKPISNFYRSPEMQDSVEFSVDVSTSIESIGALKAKLKAYLESKPQHWCSNHNVLVKDIENVNKMKMCLNVTHTINFQNYKERNSRRSELVLELKKILEDLNIKYHLLPQEVHLSYVRSQDSAAHTF* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0571 757 MobiDBLite consensus disorder prediction 22 64 - -
Gso9g0571 757 PIRSF Memb_At2g17000 1 756 IPR016688 -
Gso9g0571 757 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 13 748 IPR016688 -
Gso9g0571 757 MobiDBLite consensus disorder prediction 43 59 - -
Gso9g0571 757 SUPERFAMILY Sm-like ribonucleoproteins 578 637 IPR010920 -
Gso9g0571 757 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 13 748 - -
Gso9g0571 757 Gene3D - 588 637 IPR023408 -
Gso9g0571 757 MobiDBLite consensus disorder prediction 22 42 - -
Gso9g0571 757 Pfam Mechanosensitive ion channel 530 734 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0571 Gso-Chr9 6696483 6699906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0571 26 745 Mechanosensitive Ion Channel Family AT5G12080 51.236 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0571 K22048 - gmx:100777332 1297.72