Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0561 ATGGAGGAAATAACTTCGACTGTTGCAGTGCCATTCACACTAGAGAATTTAATACAAAAAGAGCCAGCAGTGACAACCCACATGGAGATAACTGGTCTCAAACTCAGGGCAAATACATCACCACCTTTGATATTAAATCCTTCAATTGAAATTGAAAAGCACACAGATATTGGTCCACAACCCCAAATTAAAGCGTCTTCAGAGGGAACGGAGAATCTGGTTGGAGCTGGCCTTGTCTCAGAAATGGTTAGTCAAGGAGACAATAATGGTTTGTATTCTGAAAGTCTAAAGCAGGCAAGAAAAGAGAATGAATCATTGCAAGCTAAGGATTTTCAGTGTGGTGGCAAAATTGGTCCTTGTAGGGAGGAATCTTCTGTTTTGAGGACTAATTGTGAAAGAAATTCACCTATTACCATCAAGGTTGGTGATAACATAATTGATGGAAAGTCCGGTTCGACCAAGCCGCCACGTGCTAGGGAACATGAGAGTGATAATGGAAGTGGACCAGATGAGTCTAATAAGAAAACATTTGCTGTGCCTTGTGCGATGCCAGAGAAGCCAACATGCTTGGAATTGAGTGGTGGTACTAGTACTAATTGTACTACCCCACTTTGGGGTTGTTCATCGGTTTGTGGAAGGAGAGAGGAGATGGAAGATGCTATTGCTGTTAAGCCTCATCTTTTTCAAGTCACTTCAAGGATGGTAAGGGATGATCATGTGAGTGAAAACACAAAATACTCACCAACCCATTTTTTTGGTGTCTATGATGGGCATGGGGGCATTCAGGTTGCCAATTACTGCCGGGAACATCTTCATTCGGTGTTGGTTGATGAGATAGAAGCTGCAGAATCAAGTTTCGATGGAAAGAATGGGAGGGACGGCAACTGGGAGGACCAATGGAAGAAAGCATTCTCCAATTGCTTTCACAAAGTAGATGATGAGGTTGGAGGAGTTGGTGAAGGTAGTGGTGCAAGTGTTGAACCTCTTGCTTCTGAGACTGTTGGCTCCACTGCTGTGGTTGCCATTTTGACTCAAACACACATAATAGTTGCAAATTGTGGAGATTCAAGAGCTGTCTTGTGTCGCGGAAAACAAGCACTGCCTTTGTCTGATGACCACAAACCAAATAGAGACGATGAATGGGAAAGGATAGAAGCTGCAGGAGGAAGGGTTATACAATGGAATGGGTACCGAGTTCTAGGTGTTTTGGCAGTGTCAAGATCCATAGGTGATAGGTACTTGAAGCCATGGGTAATTCCAGAGCCAGAAGTGAAGTGTGTCCAAAGAGACAAAAGCGACGAGTGCCTCATTCTAGCCAGTGATGGTTTATGGGATGTCATGACAAACGAAGAAGCCTGCGAAATTGCACGAAAGCGGATCCTTCTTTGGCATAAGAAGAATGGCAACAACTCAGTATCATCAGAACAAGGCCAAGAAGGAGTTGATCCTGCAGCTCAGTATGCTGCAGAGTATCTTTCTAGACTTGCCCTCCAAAGAGGAACCAAAGATAACATCTCTGTCATTGTTATAGACTTGAAGCCTCAGAGAAAAATCAAGAAAAAAGAATAA 1569 0.4334 MEEITSTVAVPFTLENLIQKEPAVTTHMEITGLKLRANTSPPLILNPSIEIEKHTDIGPQPQIKASSEGTENLVGAGLVSEMVSQGDNNGLYSESLKQARKENESLQAKDFQCGGKIGPCREESSVLRTNCERNSPITIKVGDNIIDGKSGSTKPPRAREHESDNGSGPDESNKKTFAVPCAMPEKPTCLELSGGTSTNCTTPLWGCSSVCGRREEMEDAIAVKPHLFQVTSRMVRDDHVSENTKYSPTHFFGVYDGHGGIQVANYCREHLHSVLVDEIEAAESSFDGKNGRDGNWEDQWKKAFSNCFHKVDDEVGGVGEGSGASVEPLASETVGSTAVVAILTQTHIIVANCGDSRAVLCRGKQALPLSDDHKPNRDDEWERIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWVIPEPEVKCVQRDKSDECLILASDGLWDVMTNEEACEIARKRILLWHKKNGNNSVSSEQGQEGVDPAAQYAAEYLSRLALQRGTKDNISVIVIDLKPQRKIKKKE* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0561 522 Pfam Protein phosphatase 2C 209 505 IPR001932 -
Gso9g0561 522 ProSiteProfiles PPM-type phosphatase domain profile. 204 512 IPR001932 -
Gso9g0561 522 Coils Coil 89 109 - -
Gso9g0561 522 Gene3D - 198 522 IPR036457 -
Gso9g0561 522 SMART PP2C_4 196 510 IPR001932 -
Gso9g0561 522 CDD PP2Cc 206 512 IPR001932 -
Gso9g0561 522 ProSitePatterns PPM-type phosphatase domain signature. 251 259 IPR000222 GO:0043169
Gso9g0561 522 SUPERFAMILY PP2C-like 202 514 IPR036457 -
Gso9g0561 522 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 106 522 - -
Gso9g0561 522 PANTHER ALPHABET, ISOFORM E-RELATED 106 522 - -
Gso9g0561 522 MobiDBLite consensus disorder prediction 153 169 - -
Gso9g0561 522 MobiDBLite consensus disorder prediction 142 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0561 Gso-Chr9 6425260 6429418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0561 201 521 PP2C-type Phosphatase Gene Family AT4G26080 60.429 2.65e-133 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0561 K14497 - gmx:100803764 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1422 15 15834850 15838949 Gso9g0561 9 6425260 6429418 GST
Gso13g0772 13 22059903 22063481 Gso9g0561 9 6425260 6429418 PCT
Gso17g0439 17 3977681 3981155 Gso9g0561 9 6425260 6429418 PCT
Gso9g0561 9 6425260 6429418 Gso13g0772 13 22059903 22063481 PCT
Gso9g0561 9 6425260 6429418 Gso17g0439 17 3977681 3981155 PCT