Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso9g0558 | ATGCGTGTGTGTGTTTTTTTTGGAGCCTCTCTCAATTTGTGTTCACAATTCACAAACCAGAAAGAAAAGAGAGAGAAAAGAAAAGAAAAGAAAAAAAAAGGGGTTAGAAGGGGAATGGAGAATCAAAAGGCGGGGGAATCGGTGCATGTGAGGGAGGAGGAGGATGACGTGGCGGTGGAGGAAGAGGAGGAACAACAAGGAGATGTTGATGTTGGTTCCAGCATGACCTTGGAGAGGGTCGCTGCAGCTAAGAAATTCATTGAGAATCATTACAGGTCTCAGAGGAAGCACATCCAAGAACGCAAGGAGAGGCGGTTAATGCTAGAGAAGAAGTTAGCATCTTCTCAAGTACCAGAAGATGAACAGATCAATCTATTGAAGGATTTAGAGCTCAAGGAAACCGAGTATATGCGGTTAAAAAGACATAAAATATGTGTTGATGATTTTGACCTTCTAACCATTATTGGCAGGGGAGCCTTTGGGGAGGTAAGGCTTTGCCGTGAAAAGAAATCAGGTAATATATATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCGTGTGACTTCATTGTGAAACTCTATTACTCTTTTCAAGATGCTGAACACTTATATCTCATAATGGAATATTTGCCTGGTGGTGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACTGAAACTGTGGCTAGATTTTACATTGCTGAAAGCGTTATTGCCATAGAGTCTATTCATAAACATAACTACATTCATCGAGATATAAAACCTGACAACCTTCTATTGGACCAATATGGTCACATGAAGCTGTCTGATTTTGGTCTTTGCAAGCCACTTGACTGCTCAAGTCTATCATCTATTAGTGAAAATGAAATCCTGGATGATGAGAACTTGAACGATACCATGGATGTTGATGGAGCCTTGCCAAATGGCAGAAATGGTAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATTAACAGGAGGAAGTTGGCATTTTCCACTGTTGGAACTCCAGACTATATTGCTCCTGAAGTACTACTGAAAAAGGGTTATGGTGTGGAGTGCGACTGGTGGTCTCTTGGTGCTATAATGTATGAAATGCTAGTTGGATATCCTCCGTTTTACTCTGATGATCCTGTATCAACATGCAGAAAGATTGTGCATTGGAAAAATCACTTGAAATTTCCAGAGGAGGTCAGATTGACACCCGAAGCCAAGGATCTAATATGCAGGTTGCTTTCCGGTGTGCCACATAGGCTTGGTACTAGAGGAGCAGAAGAAATTAAAGCTCATCCTTGGTTCAAAGATGTCATGTGGGACAGGCTCTATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGAGAGCTTGACACTCAGAATTTTATGAAATTTGATGAGGTTGAACAACCAAAATCAACTAGATCTGGATCTGGACCCTTCAGAAAGAAGCTCTTAACTTCTCAAGATCTCAGTTTTGTTGGTTATACATATAAGAATTTTGCTGCTGTCAAGGGGATGATGCACCAATCTATTAATGGCGATACAGATCCAGGGAGCTTGTCACCAAAACGGACATCTGTGGATTCCACGCAGAGTGATTCTGGAGTAAGCTATTCCGCCTGA | 1692 | 0.4155 | MRVCVFFGASLNLCSQFTNQKEKREKRKEKKKKGVRRGMENQKAGESVHVREEEDDVAVEEEEEQQGDVDVGSSMTLERVAAAKKFIENHYRSQRKHIQERKERRLMLEKKLASSQVPEDEQINLLKDLELKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVACDFIVKLYYSFQDAEHLYLIMEYLPGGDIMTLLMREETLTETVARFYIAESVIAIESIHKHNYIHRDIKPDNLLLDQYGHMKLSDFGLCKPLDCSSLSSISENEILDDENLNDTMDVDGALPNGRNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVSTCRKIVHWKNHLKFPEEVRLTPEAKDLICRLLSGVPHRLGTRGAEEIKAHPWFKDVMWDRLYEMEAAFKPQVNGELDTQNFMKFDEVEQPKSTRSGSGPFRKKLLTSQDLSFVGYTYKNFAAVKGMMHQSINGDTDPGSLSPKRTSVDSTQSDSGVSYSA* | 564 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso9g0558 | 563 | ProSitePatterns | Protein kinases ATP-binding region signature. | 155 | 178 | IPR017441 | GO:0005524 | |
Gso9g0558 | 563 | Pfam | Protein kinase domain | 349 | 456 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso9g0558 | 563 | Pfam | Protein kinase domain | 151 | 300 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso9g0558 | 563 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 57 | 562 | - | - | |
Gso9g0558 | 563 | Gene3D | Transferase(Phosphotransferase) domain 1 | 355 | 474 | - | - | |
Gso9g0558 | 563 | MobiDBLite | consensus disorder prediction | 19 | 69 | - | - | |
Gso9g0558 | 563 | SMART | pkinase_C_6 | 457 | 522 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Gso9g0558 | 563 | Gene3D | Phosphorylase Kinase; domain 1 | 475 | 485 | - | - | |
Gso9g0558 | 563 | SUPERFAMILY | Protein kinase-like (PK-like) | 132 | 501 | IPR011009 | - | |
Gso9g0558 | 563 | Gene3D | Phosphorylase Kinase; domain 1 | 147 | 228 | - | - | |
Gso9g0558 | 563 | PANTHER | AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN | 57 | 562 | - | - | |
Gso9g0558 | 563 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 457 | 530 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Gso9g0558 | 563 | Gene3D | Transferase(Phosphotransferase) domain 1 | 229 | 296 | - | - | |
Gso9g0558 | 563 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 268 | 280 | IPR008271 | GO:0004672|GO:0006468 | |
Gso9g0558 | 563 | ProSiteProfiles | Protein kinase domain profile. | 149 | 456 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso9g0558 | 563 | CDD | STKc_NDR_like | 147 | 521 | - | - | |
Gso9g0558 | 563 | SMART | serkin_6 | 149 | 456 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso9g0558 | 563 | MobiDBLite | consensus disorder prediction | 35 | 54 | - | - | |
Gso9g0558 | 563 | MobiDBLite | consensus disorder prediction | 535 | 563 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso9g0558 | Gso-Chr9 | 6381262 | 6392242 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso9g0558 | 39 | 540 | AGC Kinase Gene Family | AT2G19400 | 73.663 | 0.0 | 766 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_NDR | Gso9g0558 | Pkinase | 8.2e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso9g0558 | K08790 | - | gmx:100802177 | 1087.02 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso15g1419 | 15 | 15777487 | 15788965 | Gso9g0558 | 9 | 6381262 | 6392242 | GST |