Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0558 ATGCGTGTGTGTGTTTTTTTTGGAGCCTCTCTCAATTTGTGTTCACAATTCACAAACCAGAAAGAAAAGAGAGAGAAAAGAAAAGAAAAGAAAAAAAAAGGGGTTAGAAGGGGAATGGAGAATCAAAAGGCGGGGGAATCGGTGCATGTGAGGGAGGAGGAGGATGACGTGGCGGTGGAGGAAGAGGAGGAACAACAAGGAGATGTTGATGTTGGTTCCAGCATGACCTTGGAGAGGGTCGCTGCAGCTAAGAAATTCATTGAGAATCATTACAGGTCTCAGAGGAAGCACATCCAAGAACGCAAGGAGAGGCGGTTAATGCTAGAGAAGAAGTTAGCATCTTCTCAAGTACCAGAAGATGAACAGATCAATCTATTGAAGGATTTAGAGCTCAAGGAAACCGAGTATATGCGGTTAAAAAGACATAAAATATGTGTTGATGATTTTGACCTTCTAACCATTATTGGCAGGGGAGCCTTTGGGGAGGTAAGGCTTTGCCGTGAAAAGAAATCAGGTAATATATATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCGTGTGACTTCATTGTGAAACTCTATTACTCTTTTCAAGATGCTGAACACTTATATCTCATAATGGAATATTTGCCTGGTGGTGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACTGAAACTGTGGCTAGATTTTACATTGCTGAAAGCGTTATTGCCATAGAGTCTATTCATAAACATAACTACATTCATCGAGATATAAAACCTGACAACCTTCTATTGGACCAATATGGTCACATGAAGCTGTCTGATTTTGGTCTTTGCAAGCCACTTGACTGCTCAAGTCTATCATCTATTAGTGAAAATGAAATCCTGGATGATGAGAACTTGAACGATACCATGGATGTTGATGGAGCCTTGCCAAATGGCAGAAATGGTAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATTAACAGGAGGAAGTTGGCATTTTCCACTGTTGGAACTCCAGACTATATTGCTCCTGAAGTACTACTGAAAAAGGGTTATGGTGTGGAGTGCGACTGGTGGTCTCTTGGTGCTATAATGTATGAAATGCTAGTTGGATATCCTCCGTTTTACTCTGATGATCCTGTATCAACATGCAGAAAGATTGTGCATTGGAAAAATCACTTGAAATTTCCAGAGGAGGTCAGATTGACACCCGAAGCCAAGGATCTAATATGCAGGTTGCTTTCCGGTGTGCCACATAGGCTTGGTACTAGAGGAGCAGAAGAAATTAAAGCTCATCCTTGGTTCAAAGATGTCATGTGGGACAGGCTCTATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGAGAGCTTGACACTCAGAATTTTATGAAATTTGATGAGGTTGAACAACCAAAATCAACTAGATCTGGATCTGGACCCTTCAGAAAGAAGCTCTTAACTTCTCAAGATCTCAGTTTTGTTGGTTATACATATAAGAATTTTGCTGCTGTCAAGGGGATGATGCACCAATCTATTAATGGCGATACAGATCCAGGGAGCTTGTCACCAAAACGGACATCTGTGGATTCCACGCAGAGTGATTCTGGAGTAAGCTATTCCGCCTGA 1692 0.4155 MRVCVFFGASLNLCSQFTNQKEKREKRKEKKKKGVRRGMENQKAGESVHVREEEDDVAVEEEEEQQGDVDVGSSMTLERVAAAKKFIENHYRSQRKHIQERKERRLMLEKKLASSQVPEDEQINLLKDLELKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVACDFIVKLYYSFQDAEHLYLIMEYLPGGDIMTLLMREETLTETVARFYIAESVIAIESIHKHNYIHRDIKPDNLLLDQYGHMKLSDFGLCKPLDCSSLSSISENEILDDENLNDTMDVDGALPNGRNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVSTCRKIVHWKNHLKFPEEVRLTPEAKDLICRLLSGVPHRLGTRGAEEIKAHPWFKDVMWDRLYEMEAAFKPQVNGELDTQNFMKFDEVEQPKSTRSGSGPFRKKLLTSQDLSFVGYTYKNFAAVKGMMHQSINGDTDPGSLSPKRTSVDSTQSDSGVSYSA* 564
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0558 563 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Gso9g0558 563 Pfam Protein kinase domain 349 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0558 563 Pfam Protein kinase domain 151 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0558 563 PANTHER SERINE/THREONINE-PROTEIN KINASE 57 562 - -
Gso9g0558 563 Gene3D Transferase(Phosphotransferase) domain 1 355 474 - -
Gso9g0558 563 MobiDBLite consensus disorder prediction 19 69 - -
Gso9g0558 563 SMART pkinase_C_6 457 522 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso9g0558 563 Gene3D Phosphorylase Kinase; domain 1 475 485 - -
Gso9g0558 563 SUPERFAMILY Protein kinase-like (PK-like) 132 501 IPR011009 -
Gso9g0558 563 Gene3D Phosphorylase Kinase; domain 1 147 228 - -
Gso9g0558 563 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 57 562 - -
Gso9g0558 563 ProSiteProfiles AGC-kinase C-terminal domain profile. 457 530 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso9g0558 563 Gene3D Transferase(Phosphotransferase) domain 1 229 296 - -
Gso9g0558 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Gso9g0558 563 ProSiteProfiles Protein kinase domain profile. 149 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0558 563 CDD STKc_NDR_like 147 521 - -
Gso9g0558 563 SMART serkin_6 149 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0558 563 MobiDBLite consensus disorder prediction 35 54 - -
Gso9g0558 563 MobiDBLite consensus disorder prediction 535 563 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso9g0558 Gso-Chr9 6381262 6392242 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0558 39 540 AGC Kinase Gene Family AT2G19400 73.663 0.0 766
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Gso9g0558 Pkinase 8.2e-43 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0558 K08790 - gmx:100802177 1087.02
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1419 15 15777487 15788965 Gso9g0558 9 6381262 6392242 GST