Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0535 ATGGGAGTGGTTTTGGCACTGATTCTGCAGCTGGTGAAGCTCTGCATCATTGGCTTTGTTGTGGAATTCCAAGGATCTGAAGGGTCTGTTATATCCCCATCTCCAGCATTCCTTCCAGTCATTCATCCTAGTGGAGAAGCACCTGCTCCTATCCATCATGGACTGTCATGGGAAAGCAGTCCTCCAAAATCACCTTCAGATCCAAATGAATTTGGTATATCCCCATCTAATGAAATCATACCTGTGGATCCTTCCCCCAGTGAACCACCTGGTACTTTACACCCAAGAGAACCATGGAGAACTATTGCACCAATCCCTCCAGAAGTACCAAATGGGTCATTCTTGCCCCCTCCAGTTACTACATTACCACCTCCAACATCAGCTCCAACTCCTCAGAAGGTAAAAGGATTTGAACCATCTATATCTCCTAGTCCTAGTACAAGCACCATAGCATCATCACCACCAGCACCATATAATGCTGCTCATGCACCATCAACTTCTGAAGGGAGTGTGCCACCATCCATACAACCAAGTCCACCTCAAAGCAAAACAACACCTGCTATTAGGCCTCCTGTGTCCACACCAATTGCTCCAGCTCCAATTGCAATAACTTCTGGCAATTTGCCAAAAACTTCACCTGTCAGCCAGCCAATTGAACATGGAAGTTTGCCTCCTAAGATTGATGAGAGGAATAAGAGTCACAAGCCAGAGCCAGCTTTGCCAGCACTAGTTCCAATACCATCTACCATATTACCCAAAATTTCACCTGTAAGCCAACCAACTGAAAACGGAAGTTTGCCTCATAGAGAGGGTGCAAATAATGGTCACATTTCAGAGCCAATTTCACCAGCCCCTACAGTATTCAGTTTTCCTGAACACTCGCCAGAGAGTCAGCCAACTGAACATGGAAGTTTGCCTCCAACTGTCCCCAGAAGGAATATCAACACTGGTCGCACACTGGAGCCAGTTTCACAAGCCCCAGTTGCAACAGCTCCTGCAATTTTGCCAAAAAATTCATCAGTCAGTCAACCTACTCATCATGGAAATTCCCCACCTGATGTTCAAAATAGAACAGCAAATAATGGTCACAGTCACACCCCAGCACCAGAAATGCCACCATCAGTTACACCACCACGTCCATTTCCAGTAGATCCTCCATTGGTCCACCCAGTCATACCAGCAGCACCTCCACCAAAATCACCAGCACCTGTTGTCTCTCCTGTATCAACACCTTCTAGAAGCTTCAATTGGACCAAAGGTGGAGAACCAGTTTCTGCACCTCCATACAAAACACCAAAACCACTACCAGTTATAGTACATTCCCCTGCTCAAGCTCCTTCTTCTGCACACAAAGCAAGACAATTTCACCATGCTCCTGAGCCACCGATTTCATCTCCTGAATCTCCTTTCAACAAAGATCATCCTCCTGCGTCTTCACCTTCAACCACATTTTATAAGCATCACCATACAAGGAACACAGTCACCAGCCCTGCTCCTGCATCATCACATTCTATTTCTCCTTCCACTTCAAAACACCAAGATGGATCAAATCCTCCCTTGCCGCTTCCAACAAGTAGGCAAAGACATCATGCTCCACCACCAATGAACACAGGTTCCTCAGTTTCCCCATCTGGCCTCCCTATTCAGTCACCAGTGAGCCAAGTTTCACCTGCTCCTTCTCCGCTATTCAAAATATCCCCCCACTCAACCAAAATTCCATTGCCTCCTCCTAAAGTGTCTCCTTCTCGGCCTTCTTCCAAGACCCCTAAGAAGCCAGTTCGGCCTCGTTTTCAAGCACTGCCACCCCCACCTCCAAATGAAGATTGTATATCTCTGGTTTGCTCAGATCCCTATACAAGTACTCCACCTGGAGCACCTTGCAAATGTGTGTGGCCCATGAAAGTCGGTCTTCGCCTTAGTGTTTCTCTGTATACTTTCTTCCCTTTGGTTTCAGAGTTTGCTTCTGAAATTGCCACTGGGGTTTTCATGAAGCAAAGTCAAGTTCGCATTATGGGAGCTGATGCAGCAAACCAGCAACCTGATAAAACTATTGTATTCGTTGATTTGGTACCACTTGGGGAAGAATTTGATAACACTACAGCCTTTTTAACTTCTGAGAGATTTTGGCATAAACAAGTTGTTATAAAGACTTCTTACTTTGGTGATTATGACGTGTTATATGTGACCTATCCAGGTTTGCCTCCATCTCCTCCTTTACCTCCTTCAAGCATTTCCATAATCGATGGTGGTCCGTATTCGGGTGGTGGCAATAATGGTAGGACAATAAAACCCCTTGGGGTTGACATATCAAAGAGGCAGCATAAAGGTGGACTTAGCAAGGGCATAATTGCTATTATTGCTCTTTCAGTTTTTCTAGTAGTTGTTTTATGCTTTGCTGCTGCTTTGGCATTGTTCAAGTACAGAGATCATGTGAGTCAACCACCGTCAACCCCACGGGTTTTACCTCCTCTTACCAAAGCACCAGGTGCTGCTGGATCAGTAGTTGGAGGTGGGCTTGCTTCAGCTTCGACATCATTTCGATCTAACATTGCTGCTTACACAGGATCTGCTAAGACTTTCAGCATGAATGACATTGAGAAAGCCACAGATAATTTCCATGCTTCCAGAGTACTTGGAGAAGGTGGTTTTGGGCTTGTTTATAGTGGTACACTTGAAGATGGGACAAAAGTCGCAGTCAAGGTTCTAAAAAGAGAGGATCATCATGGCGACCGTGAATTCCTATCTGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAACTTGGTTAAGTTGATTGGTATATGCGCAGAGGTCAGCTTCCGCTGTCTAGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGTTGACAAGGAAAACAGCCCACTTGATTGGAGTGCTCGGTTAAAGATAGCTCTCGGTTCTGCTCGTGGACTGGCTTATCTACATGAAGATTCAAGTCCCCATGTCATACATAGGGACTTCAAGTCGAGCAATATCTTGCTGGAAAATGATTTTACACCAAAAGTATCGGATTTTGGATTGGCCCGAACAGCAGCTGATGAGGGGAACAGACACATATCAACACGAGTGATGGGAACTTTTGGTTATGTGGCTCCGGAGTATGCAATGACGGGACATCTTCTTGTGAAGAGTGATGTTTACAGCTATGGTGTTGTCCTCCTTGAGCTTTTGACCGGAAGAAAACCAGTAGACATGTCACGACCTCCCGGTCAAGAAAATCTCGTTGCATGGGCTCGTCCATTACTCTCAAGCGAAGAAGGATTGGAAGCAATGATAGATCCATCTCTAGGACATGATGTGCCTTCTGATAGTGTGGCTAAGGTTGCAGCCATTGCTTCAATGTGTGTACAGCCAGAGGTGTCGGACCGTCCCTTCATGGGCGAGGTTGTTCAGGCTTTAAAACTTGTGTGCAATGAATGTGATGAGGCAAGAGAAGCAGGTTCTAGCTCTAGTTCTGTTGATTTAAGTCACTCTAGACAACCATCAGATAATTTACAAGGCCAATTCTCAGCCACCAACTATGATTCTGGAATTGATATTGAAAATGGGTTGTTAGCATCAGAGTTATTCAGCTCATCGGCGAGATATGGAAGGCGAGTGTCCGGATCGTTTAGAAGGCATTCTTATTCAGGTCCTCTGAATACTGGAAGAAGCAAGAGGTTGTGGCAGATAATTAGAAAGCTTTCTGGCGGTAGTATCAGTGAACATGGAACTATGTTTAAGTTATGA 3765 0.4526 MGVVLALILQLVKLCIIGFVVEFQGSEGSVISPSPAFLPVIHPSGEAPAPIHHGLSWESSPPKSPSDPNEFGISPSNEIIPVDPSPSEPPGTLHPREPWRTIAPIPPEVPNGSFLPPPVTTLPPPTSAPTPQKVKGFEPSISPSPSTSTIASSPPAPYNAAHAPSTSEGSVPPSIQPSPPQSKTTPAIRPPVSTPIAPAPIAITSGNLPKTSPVSQPIEHGSLPPKIDERNKSHKPEPALPALVPIPSTILPKISPVSQPTENGSLPHREGANNGHISEPISPAPTVFSFPEHSPESQPTEHGSLPPTVPRRNINTGRTLEPVSQAPVATAPAILPKNSSVSQPTHHGNSPPDVQNRTANNGHSHTPAPEMPPSVTPPRPFPVDPPLVHPVIPAAPPPKSPAPVVSPVSTPSRSFNWTKGGEPVSAPPYKTPKPLPVIVHSPAQAPSSAHKARQFHHAPEPPISSPESPFNKDHPPASSPSTTFYKHHHTRNTVTSPAPASSHSISPSTSKHQDGSNPPLPLPTSRQRHHAPPPMNTGSSVSPSGLPIQSPVSQVSPAPSPLFKISPHSTKIPLPPPKVSPSRPSSKTPKKPVRPRFQALPPPPPNEDCISLVCSDPYTSTPPGAPCKCVWPMKVGLRLSVSLYTFFPLVSEFASEIATGVFMKQSQVRIMGADAANQQPDKTIVFVDLVPLGEEFDNTTAFLTSERFWHKQVVIKTSYFGDYDVLYVTYPGLPPSPPLPPSSISIIDGGPYSGGGNNGRTIKPLGVDISKRQHKGGLSKGIIAIIALSVFLVVVLCFAAALALFKYRDHVSQPPSTPRVLPPLTKAPGAAGSVVGGGLASASTSFRSNIAAYTGSAKTFSMNDIEKATDNFHASRVLGEGGFGLVYSGTLEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICAEVSFRCLVYELIPNGSVESHLHGVDKENSPLDWSARLKIALGSARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEGNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSRPPGQENLVAWARPLLSSEEGLEAMIDPSLGHDVPSDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAREAGSSSSSVDLSHSRQPSDNLQGQFSATNYDSGIDIENGLLASELFSSSARYGRRVSGSFRRHSYSGPLNTGRSKRLWQIIRKLSGGSISEHGTMFKL* 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0535 1254 MobiDBLite consensus disorder prediction 173 197 - -
Gso9g0535 1254 MobiDBLite consensus disorder prediction 291 323 - -
Gso9g0535 1254 MobiDBLite consensus disorder prediction 137 172 - -
Gso9g0535 1254 CDD STKc_IRAK 878 1146 - -
Gso9g0535 1254 MobiDBLite consensus disorder prediction 530 560 - -
Gso9g0535 1254 Pfam Protein tyrosine and serine/threonine kinase 874 1145 IPR001245 GO:0004672|GO:0006468
Gso9g0535 1254 MobiDBLite consensus disorder prediction 370 405 - -
Gso9g0535 1254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 994 1006 IPR008271 GO:0004672|GO:0006468
Gso9g0535 1254 PANTHER OS01G0750732 PROTEIN 421 1254 - -
Gso9g0535 1254 PANTHER OS01G0750732 PROTEIN 7 79 - -
Gso9g0535 1254 MobiDBLite consensus disorder prediction 471 523 - -
Gso9g0535 1254 ProSiteProfiles Protein kinase domain profile. 872 1148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0535 1254 MobiDBLite consensus disorder prediction 59 73 - -
Gso9g0535 1254 MobiDBLite consensus disorder prediction 1159 1180 - -
Gso9g0535 1254 Gene3D Phosphorylase Kinase; domain 1 843 947 - -
Gso9g0535 1254 Gene3D Transferase(Phosphotransferase) domain 1 948 1169 - -
Gso9g0535 1254 ProSitePatterns Protein kinases ATP-binding region signature. 878 900 IPR017441 GO:0005524
Gso9g0535 1254 MobiDBLite consensus disorder prediction 252 268 - -
Gso9g0535 1254 MobiDBLite consensus disorder prediction 100 130 - -
Gso9g0535 1254 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 421 1254 - -
Gso9g0535 1254 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 7 79 - -
Gso9g0535 1254 MobiDBLite consensus disorder prediction 335 367 - -
Gso9g0535 1254 SUPERFAMILY Protein kinase-like (PK-like) 853 1145 IPR011009 -
Gso9g0535 1254 MobiDBLite consensus disorder prediction 49 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0535 Gso-Chr9 5983232 5993559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0535 364 1250 Receptor kinase-like Gene Family AT5G56890 56.209 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso9g0535 PK_Tyr_Ser-Thr 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0535 - - gmx:100802309 2068.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1397 15 15293241 15303775 Gso9g0535 9 5983232 5993559 GST