Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0528 ATGCCTCTTCGAGTACTCCAAGAAGTTACTTCACCCTCTAATGAGTCACATGCACCACCGCACCAATCCGAATCATTGTTTTACATCCTCGGAGGAATAGTTGTGCTGGCCATAGTGTTGATTTTTTTGTATGTAGTTCGCAAGCGAATTAAACGGCCAGCACAGACGATGACAGTTGCAACTAATGAGCAGCAAGAGTTTGGGGGACACAATGAATCGGCAGAGGTGATGAAGATGATATTTTCATCTAATCAACACTCAGGATCAAAGGAGTTCTTTAGTGGGAACCTTCGGACTATTAGCTGCTTTGACTACCAGACATTGAAGAAAGCAACCAGGAATTTCCATCCTGATAACCTTCTTGGAAGTGGTGGATTTGGACCTGTTTACCAGGGAAAGTTGGTAGATGAAAGGCTAGTTGCTGTTAAGAAATTGGCTCTAAACAAATCCCAACAGGGAGAAAAAGAATTTCTGGTAGAGGTGAGAACAATCACTAGTATCCAACACAAAAATCTGGTTCGCCTTCTTGGATGCTGCCTAGATGGGCCTCAAAGGTTACTTGTCTATGAATACATGAAGAACAGAAGTTTGGACCTCTTTATACATGGGAACAGTGATCAATTTCTGAATTGGAGCACAAGGTTCCAAATTATTCTGGGAGTAGCGCGAGGACTACAATACCTTCATGAGGATTCACACCCAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAAGTTTCATCCAAGGATTGGAGACTTTGGGCTAGCTAGATTTTTCCCTGAAGACCAAGCTTATCTTAGCACACAGTTCGCTGGAACTTTAGGTTATACAGCTCCTGAATACGCTATTAGAGGAGAGTTGTCAGAAAAGGCAGATATCTATAGTTTTGGAGTTCTGGTGCTTGAAATAATATGTTGCAGGAAAAACACAGAGCATACTTTGCCATCAGAAATGCAGTACCTCCCAGAATATGCATGGAAACTGTACGAGAATGCAAGGATATTGGACATTGTAGATCCAAAGCTGAGACAACATGGATTCGTAGAAAAGGATGTCATGCAAGCAATCCATGTGGCTTTCTTATGCCTGCAGCCTCATGCACATTTGAGGCCTCCCATGTCAGAGATCGTGGCATTGCTGACATTCAAAATAGAAATGGTTACAACACCAATGAGGCCAGCCTTCCTCGATCAAAGGCCGAGAGAGGATGGTGAGAACCATCCTTTGGAAGCATTATCCCAGGGTTTCACATCTCCCATTTATGTAAAAGCATCTGATTGA 1299 0.4273 MPLRVLQEVTSPSNESHAPPHQSESLFYILGGIVVLAIVLIFLYVVRKRIKRPAQTMTVATNEQQEFGGHNESAEVMKMIFSSNQHSGSKEFFSGNLRTISCFDYQTLKKATRNFHPDNLLGSGGFGPVYQGKLVDERLVAVKKLALNKSQQGEKEFLVEVRTITSIQHKNLVRLLGCCLDGPQRLLVYEYMKNRSLDLFIHGNSDQFLNWSTRFQIILGVARGLQYLHEDSHPRIVHRDIKASNILLDDKFHPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIICCRKNTEHTLPSEMQYLPEYAWKLYENARILDIVDPKLRQHGFVEKDVMQAIHVAFLCLQPHAHLRPPMSEIVALLTFKIEMVTTPMRPAFLDQRPREDGENHPLEALSQGFTSPIYVKASD* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0528 432 ProSiteProfiles Protein kinase domain profile. 115 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0528 432 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 94 400 - -
Gso9g0528 432 PANTHER RECEPTOR-LIKE KINASE 94 400 - -
Gso9g0528 432 SMART serkin_6 115 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0528 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Gso9g0528 432 Gene3D Transferase(Phosphotransferase) domain 1 192 395 - -
Gso9g0528 432 CDD STKc_IRAK 121 387 - -
Gso9g0528 432 SUPERFAMILY Protein kinase-like (PK-like) 95 389 IPR011009 -
Gso9g0528 432 Pfam Protein tyrosine and serine/threonine kinase 119 384 IPR001245 GO:0004672|GO:0006468
Gso9g0528 432 Gene3D Phosphorylase Kinase; domain 1 83 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0528 Gso-Chr9 5876077 5880409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0528 103 409 Receptor kinase-like Gene Family AT1G56120 47.883 1.57e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso9g0528 PK_Tyr_Ser-Thr 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0528 - - gmx:100791042 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1388 15 15112182 15116664 Gso9g0528 9 5876077 5880409 GST
Gso17g0471 17 4253761 4257500 Gso9g0528 9 5876077 5880409 PCT
Gso9g0528 9 5876077 5880409 Gso17g0471 17 4253761 4257500 PCT