Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0483 ATGGAAGATACTAGCTTCTTTGTGATCTTATCATCCTTTCTGCTTCTCATAGTTAGTACACAAACAAGCTCAGCTCAACTTACTCGTGGCTTCTATCGAAACACGTGCCCCAATGTGGAACAGTTGGTTCGTTCAGCTGTGGAGCAGAAGTTCCAGCAAACCTTTGTGACTGCCCCTGCCACTCTTAGACTCTTCTTCCATGATTGCTTTGTGAGGGGTTGTGATGCTTCCATTTTGCTTGCATCTCCAAACAACAAGGCAGAGAAAAATCATCCTGATGACATTTCACTAGCTGGGGATGGCTTTGACACAGTTGTTAAAGCCAAGGCAGCGGTTGATAGTGACCCTCAATGCAGAAACAAAGTCTCTTGTGCTGATATTCTTGCTCTGGCTACTAGAGATGTGATAAATTTGGCTGGGGGACCATTTTATGAAGTTGAATTGGGAAGGCTTGACGGAAGAATATCTACTATTGCTAGTGTTCAACGCCAGCTTCCTCACCCTGATTTCAATTTAGATAAGCTCAATTCCATGTTTAGCTTCCATGGCCTCACAAAGACAGATATGATTGCCTTATCAGGTGCACATACAATTGGATTCTCTCACTGCAACCATTTCTCAAGACGGATCTACAACTTCAGCCCCCAAAAATTAATTGACCCAACACTTAACTTACAATATGCCTTCCAACTTAGACAGGCTTGCCCTCTCAGAGTTGATTCTAGAATTGCCATAAACATGGACCCTGTCACACCTGAAAAGTTTGACAACCAATACTTCAAGAATCTCCAGCAAGGAATGGGCCTATTCACTTCTGATCAGGTGCTGGCTACAGATGAAAGGTCAAGGGGCACAGTCAACTTATTTGCATCAAATGAACAAGCTTTTAACAAAGCTTTTATTGAAGCTATTACTAAAATGGGAAGGATAGGTGTTAAAACAGGTAGACAAGGGGAAATAAGGTTTGATTGCTCCAGGGTGAACTGA 987 0.4255 MEDTSFFVILSSFLLLIVSTQTSSAQLTRGFYRNTCPNVEQLVRSAVEQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPNNKAEKNHPDDISLAGDGFDTVVKAKAAVDSDPQCRNKVSCADILALATRDVINLAGGPFYEVELGRLDGRISTIASVQRQLPHPDFNLDKLNSMFSFHGLTKTDMIALSGAHTIGFSHCNHFSRRIYNFSPQKLIDPTLNLQYAFQLRQACPLRVDSRIAINMDPVTPEKFDNQYFKNLQQGMGLFTSDQVLATDERSRGTVNLFASNEQAFNKAFIEAITKMGRIGVKTGRQGEIRFDCSRVN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0483 328 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 Pfam Peroxidase 43 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 Gene3D Peroxidase, domain 2 166 307 - -
Gso9g0483 328 PANTHER PEROXIDASE 16-RELATED 10 328 - -
Gso9g0483 328 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Gso9g0483 328 Gene3D - 30 328 - -
Gso9g0483 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Gso9g0483 328 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0483 328 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Gso9g0483 328 PANTHER - 10 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0483 Gso-Chr9 5087814 5091344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0483 1 328 Peroxidase AT2G18980 72.866 4.12e-178 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0483 K00430 - gmx:100808542 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1342 15 14082473 14085441 Gso9g0483 9 5087814 5091344 GST
Gso17g0514 17 4692578 4694799 Gso9g0483 9 5087814 5091344 PCT
Gso9g0483 9 5087814 5091344 Gso17g0514 17 4692578 4694799 PCT