Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0482 ATGGGGGATGATGATGAGCTACTTAAAGAAATTGTCAAACTTGTGCTGAAAAGGTTGGGTAAACACCTGGTTGACTCAAAGGGACTTGTTGGAATTGACAAAAAAATTGCAGATATAGAATCATTGATACGCAAAGAGTCAAAAGATACTCGTCTTATTGGAATTTGGGGTATGGGCGGTATCGGAAAGACAACCCTCCCACAAGAAGTATTTAACAAACTACAGTCTGAATATCAAGGTTCTTATTTTTTAGCCAATGAAAGAGAACAATCAAGCAAAGATGGAATAATTTCTTTGAAGAAAGAAATTTTTACTGAACTATTAGGACATGTTGTGAAAATTGACACTCCAAATTCATTGCCCAATGATACCATTCGTCGTATGAAGGTTCTTATTGTTCTTGATGATGTGAATGATTCAGATCACCTAGAAAAATTACTGGGAACTCTTGATCATTTTGGAGCAGGTAGTAGAATACTTATAACAACTAGAGATGAGCAAGTGCTTAATGCTAACAAAGCTGATGAGATATACCGTCTTAGAGAATTCAATTTTGATAAAGCATTTGAACTTTTCAAATTGAATGCCTTTAACCAAAGTGATAATCAAAGTGAGTATGATGAGTTATCACAAAGGGTGGTCAATTATGCCAAAGGCATTCCATTAGTTCTTAAAGTTTTGGCTCGTCTTCTTCGTGGAAAAAATAAGGAAGTATGGGAAAGTGAGCTTGACAAGCTTGAAAAAATGCCTCTTCGAGAAGTTTGTGACATAATGAAACTGAGTTATGTTGATCTGGATCGCAAAGAACAACAGATTTTTCTAGATCTTGCATGTTTCTTTCTTAGATCACAAACAAAGATAACGATAGACTATCTAAATTCTCTGTTGAAAGATAGTGAAAGTGACAATTCAGTGGTTGTTGGGTTAGAAAGGCTGAAAGATAAAGCACTTATAACTTTCTTGGAGAATAATTTTATATCTATACATGATAGTTTACAAGAAATGGCTTGTGAGATTGTTCGTCAAGAGTCTACTGGAGACCCTGGAAGTCGTAGTCGCTTGTGGGATCTCGATGACATATATGAAGCATTGAAAAATTACAAGGGTAATGAGGCCATTAGAAGCATACTACTTCACTTGCCAACAACTAAGAAGGAAAATTTAAGCCCTCGCTTATTTGCTAAGATGAACAGACTACGATTTCTGGAAGTTTCTGTAGAAGATAATTATGACTGCTTTGATATTCTTGCTAAAGGGCTTAAATTTTTGGCAACTGAACTTAGATTTCTTAGTTGGAAGAGTTACTCTGGAAAATCCTTACCAGAGATTTTTTCTACTGAAAAACTTGTGATATTGAAATTACCATACAGTGGAATGGAAAAACTTTGGCTTGGAGTGAAGAATCTAGTGAATTTGAAAGAACTTGACCTCAGGTGCTCCAAGAAGTTAAAGGAACTACCAGATATATCAAAAGCCACAAATCTTGAAGTAATACTTCTCCGGGGTTGTTCTATGTTGACTAATGTGCATCCATCTATTTTCTCCCTGCCCAAACTTGAAAGATTGAACCTTTCTGATTGCGAGTCCCTTAACATACTAACAAGCAATTCCCATTTACGCAGCCTCAGTTATCTCGACCTTGATTTTTGCAAGAATCTTAAGAAATTCTCAGTGGTATCAAAGAATATGAAAGAACTGAGATTAGGATGCACAAAGGTGAAAGCACTTCCCTCATCATTTGGGCATCAAAGCAAGCTTAAATTGCTACATCTTAAAGGAAGTGCCATTAAGAGGTTACCTTCATCCTTCAATAATCTTACACAACTGCTACATCTGGAGCTAAGCAATTGCAGCAAGCTTGAAACAATAGAAGAGCTTCCCCCATTCCTCGAAACTCTAAATGCCCAATATTGCACTTGTCTTCAAACTCTTCCAGAGCTTCCCAAATTGCTTAAAACTTTAAATGTCAAAGAATGCAAATCGCTTCAGAGTCTACCAGAGCTTTCCCCGTCGCTAGAAATTCTAAATGCAAGAGACTGCGAATCATTGATGACTGTATTGTTTCCTTCAACGGCGGTTGAACAATTAAAGGAAAATAGGAAACAGGTTATGTTCTGGAATTGCTTGAACTTGGATGAACATTCTCTAGTGGCTATTGGGTTGAATGCACAAATCAACATGATGAAATTCGCAAACCACCACCTATCTACACCAAATCGTGAGCATGTTGAAAATTACAATGATTCTTTTCAAGTTGTTTACATGTATCCAGGAAGCAGTGTTCCAGGGTGGTTGGAGTACAAGACAAGAAATTATCATATAACTATTGATCTCTCTTCTGCTCCACCTTCCCCGCAGAGGAGCTTCGTCTTCTGCTTCGTCCTTGGTGAGTTCCAACGGACAGACATAATTAGAACACTTGAATTTAGCATCACTATGAATGAGGGTGAAGGTAAAGAGGACAGTGTCAGCATGTACATAGATTATTTGGGTTGGTCATCAATTGAATCAGATCACGTGTGTGTGATGTACGACCAAAGATGTTCTGAATTCCTCTGGTGTCAGCCCCATAAGGACCTTGGCATATAA 2589 0.3739 MGDDDELLKEIVKLVLKRLGKHLVDSKGLVGIDKKIADIESLIRKESKDTRLIGIWGMGGIGKTTLPQEVFNKLQSEYQGSYFLANEREQSSKDGIISLKKEIFTELLGHVVKIDTPNSLPNDTIRRMKVLIVLDDVNDSDHLEKLLGTLDHFGAGSRILITTRDEQVLNANKADEIYRLREFNFDKAFELFKLNAFNQSDNQSEYDELSQRVVNYAKGIPLVLKVLARLLRGKNKEVWESELDKLEKMPLREVCDIMKLSYVDLDRKEQQIFLDLACFFLRSQTKITIDYLNSLLKDSESDNSVVVGLERLKDKALITFLENNFISIHDSLQEMACEIVRQESTGDPGSRSRLWDLDDIYEALKNYKGNEAIRSILLHLPTTKKENLSPRLFAKMNRLRFLEVSVEDNYDCFDILAKGLKFLATELRFLSWKSYSGKSLPEIFSTEKLVILKLPYSGMEKLWLGVKNLVNLKELDLRCSKKLKELPDISKATNLEVILLRGCSMLTNVHPSIFSLPKLERLNLSDCESLNILTSNSHLRSLSYLDLDFCKNLKKFSVVSKNMKELRLGCTKVKALPSSFGHQSKLKLLHLKGSAIKRLPSSFNNLTQLLHLELSNCSKLETIEELPPFLETLNAQYCTCLQTLPELPKLLKTLNVKECKSLQSLPELSPSLEILNARDCESLMTVLFPSTAVEQLKENRKQVMFWNCLNLDEHSLVAIGLNAQINMMKFANHHLSTPNREHVENYNDSFQVVYMYPGSSVPGWLEYKTRNYHITIDLSSAPPSPQRSFVFCFVLGEFQRTDIIRTLEFSITMNEGEGKEDSVSMYIDYLGWSSIESDHVCVMYDQRCSEFLWCQPHKDLGI* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0482 862 SMART LRR_bac_2 648 668 - -
Gso9g0482 862 SMART LRR_bac_2 469 489 - -
Gso9g0482 862 SMART LRR_bac_2 627 647 - -
Gso9g0482 862 Gene3D - 183 266 IPR042197 -
Gso9g0482 862 Pfam Leucine Rich Repeat 448 467 IPR011713 -
Gso9g0482 862 PRINTS Disease resistance protein signature 52 67 - -
Gso9g0482 862 PRINTS Disease resistance protein signature 124 138 - -
Gso9g0482 862 PRINTS Disease resistance protein signature 217 231 - -
Gso9g0482 862 PRINTS Disease resistance protein signature 537 553 - -
Gso9g0482 862 SUPERFAMILY L domain-like 378 684 - -
Gso9g0482 862 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 2 826 - -
Gso9g0482 862 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 276 IPR027417 -
Gso9g0482 862 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 826 IPR044974 GO:0006952
Gso9g0482 862 Pfam NB-ARC domain 39 252 IPR002182 GO:0043531
Gso9g0482 862 SUPERFAMILY "Winged helix" DNA-binding domain 253 365 IPR036390 -
Gso9g0482 862 Gene3D Ribonuclease Inhibitor 561 702 IPR032675 -
Gso9g0482 862 Gene3D Ribonuclease Inhibitor 366 560 IPR032675 -
Gso9g0482 862 Gene3D - 16 177 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0482 Gso-Chr9 5074510 5078075 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0482 4 621 WRKY Transcription Factor Family AT4G12020 35.759 2.97e-90 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0482 - - gsj:114404194 1685.62