Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0478 ATGGAGGGTCAACCAGCTAAAAGGAGACGTGTATACTCACTTGAACCAACTAAAGTGGAACAAGCAGCGTTTGCAAGAAACTACATGAATTGTTTGGTGCCAGCATTGATGAAGATCAAGGAAAGATCAAGCACTTCAGCAGAACAACATAGTGTTCATTCATGTGATGATGACAATATTCAGAATGTTGTCAAGTATGAAGTGGACATGGCAATGGTGCGCTCAGCCCAAGGGTATGCATGGAGCAATGCTTTAAGTGTGAAGCTTCAAAGGAATAGAGTCAATGTAGATTGTGACACCACTAGCTTTGGGGAAGGTTCACCATCAAGGGTTTGTGGCCAAAACTATGAAATGGTGCCATTGAGTAATTTCTCTTCAAACCCTAGTTTGAAGTCTAATAACAAGTGCAAGGAAATGTCTGAAATGAAAAGGGGTTTGAGAGAAGATGATGATGGTGGTGGTGATGAAGATGAAGTCATCAAGGGCCAATTGAAGAGCCTAAGAAGGTTGATACCTGGTGGAGAAGAGATGTGTAGTGAACAAATGGTGACTGAGCTACAAAGCTATGTAAGCTGTTTGCAAATGCAGGTGAACATTCTTCAGTGCCTCGCTGAGACACATTGA 624 0.4215 MEGQPAKRRRVYSLEPTKVEQAAFARNYMNCLVPALMKIKERSSTSAEQHSVHSCDDDNIQNVVKYEVDMAMVRSAQGYAWSNALSVKLQRNRVNVDCDTTSFGEGSPSRVCGQNYEMVPLSNFSSNPSLKSNNKCKEMSEMKRGLREDDDGGGDEDEVIKGQLKSLRRLIPGGEEMCSEQMVTELQSYVSCLQMQVNILQCLAETH* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0478 207 PANTHER TRANSCRIPTION FACTOR BHLH146 3 206 - -
Gso9g0478 207 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 206 IPR044660 GO:0006355
Gso9g0478 207 CDD bHLH_AtIBH1_like 160 204 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0478 Gso-Chr9 5040154 5041452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0478 7 89 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 40.964 1.66e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0478 - - gmx:100527269 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1336 15 14017735 14018855 Gso9g0478 9 5040154 5041452 GST
Gso13g0707 13 21284792 21286246 Gso9g0478 9 5040154 5041452 PCT
Gso17g0517 17 4715179 4716683 Gso9g0478 9 5040154 5041452 PCT
Gso9g0478 9 5040154 5041452 Gso13g0707 13 21284792 21286246 PCT
Gso9g0478 9 5040154 5041452 Gso17g0517 17 4715179 4716683 PCT