Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0473 ATGTCAACAAGCACTGACGATGGTGCTTCAGTTGGGGCTGTAGTTGTCATCGTTCTGGTGATTGCAGTGAAGGTTGGAATTTTGATTTGTGTGTGCCGAAGAAGAAATCAGACAGATAGCAGACCAGTAATTCCAGGTTCAAAATTTCTGACACTGGCTATTGATAAATTTCTGAATGACATGGAAAGAGAGAAGCCAATCAGGTTCACTGATCAACAGCTAAGGATTGCAACTGATAACTACTCTAACTTGTTGGGATCAGGAGGTTTTGGAACAGTTTATAAAGGAATTTTTACTAATGGGACCATGGTTGCTGTAAAAGTTCTACGTGGATCTTCAAACAAGAAAATCGAGGAGCAGTTTATGGCAGAAGTTGGCACAATTGGCAGAATTCATCATTTCAATCTTGTTCGGCTCTACGGATTTTGCTTTGAGAACAACTTGATAGCACTGGTTTATGAGTACATGGGAAATGGCTCTCTTGATAAGTATTTGTTCCATGAAAAGAAGACCTTAGGATATGAAAAGCTTCATGATATTGCAGTTGGGACAGCCAGAGGCATTGCTTATTTGCATGAAGAGTGCCAACAAAGAATAATCCATTATGACATAAAGCCAGGAAATATTCTATTGGACAGGAATTTCAATCCTAAAGTTGCTGATTTCGGTTTAGCCAAGCTTTGCAACAGGGACAATACTCACATAACCATGACTGGAGGTAGGGGAACTCCAGGTTATGCTGCACCTGAGCTTTGGATGCCGTTTCCAATAACTCACAAGTGTGATGTTTATAGTTATGGCATGCTGTTATTTGAAATCATAGGCAGGAGAAGAAACCTTGATATTAAACTCGCTGAAAGCCAAGAGTGGTTTCCAACATGGGTTTGGAAAAAAATTGATACTGGACAACTGGGGGAGTTAATGATAGTTTGTGAGATAGAGGAGAGAAGTAAGGAGATTGCAGAAAGAATGATTAAGATAGCTTTGTGGTGTGTTCAATATAGGCAAGAATTAAGGCCCATAATGAGTGTTGTGGTGAAAATGCTGGAAGGTTCACTGGAAGTTCCAGAACCTGGGAATCCATTTCAGCACTTGATGGGTGCGGTTACCGTTGCTCATCCAGTCCAAGAGTCAAAGACGTATAATACAACAACCATTTCATCTGGGTCTTCTGTTATAGTAACAGACTCCAGCGTTGTATGTGCTACTCCTATTATGAGGAAGTATGAGATTGAATTGGCCTCTAGTAATGTATGA 1257 0.4033 MSTSTDDGASVGAVVVIVLVIAVKVGILICVCRRRNQTDSRPVIPGSKFLTLAIDKFLNDMEREKPIRFTDQQLRIATDNYSNLLGSGGFGTVYKGIFTNGTMVAVKVLRGSSNKKIEEQFMAEVGTIGRIHHFNLVRLYGFCFENNLIALVYEYMGNGSLDKYLFHEKKTLGYEKLHDIAVGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFNPKVADFGLAKLCNRDNTHITMTGGRGTPGYAAPELWMPFPITHKCDVYSYGMLLFEIIGRRRNLDIKLAESQEWFPTWVWKKIDTGQLGELMIVCEIEERSKEIAERMIKIALWCVQYRQELRPIMSVVVKMLEGSLEVPEPGNPFQHLMGAVTVAHPVQESKTYNTTTISSGSSVIVTDSSVVCATPIMRKYEIELASSNV* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0473 418 Gene3D Phosphorylase Kinase; domain 1 55 155 - -
Gso9g0473 418 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Gso9g0473 418 Pfam Protein kinase domain 83 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0473 418 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 415 IPR045874 GO:0004672
Gso9g0473 418 SMART serkin_6 79 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0473 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Gso9g0473 418 ProSiteProfiles Protein kinase domain profile. 79 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0473 418 SUPERFAMILY Protein kinase-like (PK-like) 63 350 IPR011009 -
Gso9g0473 418 Gene3D Transferase(Phosphotransferase) domain 1 156 357 - -
Gso9g0473 418 PANTHER PUTATIVE-RELATED 10 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0473 Gso-Chr9 4928641 4930420 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0473 2 382 Receptor kinase-like Gene Family AT1G66910 38.046 6.38e-80 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gso9g0473 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0473 - - gmx:100816921 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1329 15 13892604 13893945 Gso9g0473 9 4928641 4930420 GST