Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0471 ATGTCCACGGGCACCTCCAGCTTGCCGACCACCTTCTCGAGTGACAATTCTAGTTCCAATGGAGGTGTAGTTCTATTTATGATGGTTATGGTTCTTGGATTGATATTGATAGGTATTCTCATTTGGTGCTCAGTGCCCAAATGCATAAATTGGTTTGACGGTATTCAGAAATCATCATCTAGACAGACACCAGACACAAAATTTATGACACTCGCTGTGGATAAGTTTCTGAATGACATGGAAAGAGAGAAGCTAATCAGGTTCACTGATCAACAGCTAAGGATTGCAACTGATAATTACTCTTCTCTGTTGGGATCTGGAGGATTCGGAAAAGTTTATAGAGGAAGTTTGAGTAATGGAACCATGATTGCTGTGAAGGTTCTACGTGAGAGTTCTGACAAGAGAATTGATGAACAGTTTATGGCAGAAGTGGGTACCCTTGGTAAAGTTCATCACTTCAATCTAGTTCATCTGCATGGATTTTGCTTTGAAGCAAACTTGAGAGCTCTGGTTTACGAGTACATGGTGAATGGCGCGCTTGAAAAATACCTGTTTCATGAAAGCATGACCTTATCATTTGAAAAGCTTCATGAGATCGCAGTTGGCACAGCGAGAGGCATCGCTTACTTGCATGAAGAATGCCAACAGAGAATAATCCACTATGACATTAAACCAGGAAATATTCTCTTGGACAGGAATTTCAATCCTAAAGTTGCTGATTTTGGTTTAGCCAAGCTTTGTAACCGGGAAATTACACATCTAACCTTGACCAAGAGTAGGGGGACTCCTGGTTATGCTGCACCTGAACTTTGGATGCCTAATTTTCCTGTGACTCACAAGTGTGATGTTTACAGCTTTGGAATGCTGTTATTTGAAATCATAGGCAGGAGAAGAAACCTTGACGTTGAACTTGTTGAAAGCCAGGAGTGGTTTCCAGTGTGGGTTTGGAAAAGATTTGAGGCTGGAGAATTTGAGGAGTTGATAATAGCATGTGGGATAGAAGAGAAAAATGGGGAGATAGCAGAGAGAATGGTTAATGTAGCTCTATTGTGTGTTCAGTACAGGCCAGATTTAAGGCCTATAATGAGGGATGTGGTGAAAATGTTGGAAGGTTCTGTTGAAGTTCCAAAACCTGTGATTCCGTTTCCACACTTGATTGATTTGACTTCCACCACTGGTCCGGTCCAAGCATCACAAACCAATACTGATGCAAGTATTGGTTATTACTCTTCAGCAATGACAACCAAATCTGTCAATGTACTTGGCACTCCTACTACGACCAAGTATGAGATTAAATTAGCCTCTGTGTAG 1311 0.4134 MSTGTSSLPTTFSSDNSSSNGGVVLFMMVMVLGLILIGILIWCSVPKCINWFDGIQKSSSRQTPDTKFMTLAVDKFLNDMEREKLIRFTDQQLRIATDNYSSLLGSGGFGKVYRGSLSNGTMIAVKVLRESSDKRIDEQFMAEVGTLGKVHHFNLVHLHGFCFEANLRALVYEYMVNGALEKYLFHESMTLSFEKLHEIAVGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFNPKVADFGLAKLCNREITHLTLTKSRGTPGYAAPELWMPNFPVTHKCDVYSFGMLLFEIIGRRRNLDVELVESQEWFPVWVWKRFEAGEFEELIIACGIEEKNGEIAERMVNVALLCVQYRPDLRPIMRDVVKMLEGSVEVPKPVIPFPHLIDLTSTTGPVQASQTNTDASIGYYSSAMTTKSVNVLGTPTTTKYEIKLASV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0471 436 Gene3D Transferase(Phosphotransferase) domain 1 175 377 - -
Gso9g0471 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Gso9g0471 436 SMART serkin_6 98 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0471 436 SUPERFAMILY Protein kinase-like (PK-like) 83 370 IPR011009 -
Gso9g0471 436 Pfam Protein tyrosine and serine/threonine kinase 102 369 IPR001245 GO:0004672|GO:0006468
Gso9g0471 436 ProSitePatterns Protein kinases ATP-binding region signature. 104 126 IPR017441 GO:0005524
Gso9g0471 436 PANTHER RUST RESISTANCE KINASE LR10-RELATED 34 431 IPR045874 GO:0004672
Gso9g0471 436 PANTHER PUTATIVE-RELATED 34 431 - -
Gso9g0471 436 ProSiteProfiles Protein kinase domain profile. 98 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0471 436 Gene3D Phosphorylase Kinase; domain 1 73 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0471 Gso-Chr9 4880900 4883273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0471 85 384 Receptor kinase-like Gene Family AT5G38280 42.903 2.09e-80 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gso9g0471 PK_Tyr_Ser-Thr 7.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0471 - - gmx:100815859 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1327 15 13837051 13838783 Gso9g0471 9 4880900 4883273 GST