Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0453 ATGGAAGAGGCACGTAAAGGGGAGCAAGAGAAAGAGAGAGGAGAGGAAGAAGTGAAGTACCGTGGAGTGAGAAAGAGGCCATGGGGTAAGTTCGGAGCAGAGATCAGAGACCCAACAAAACCTACGGGAAGGCAATGGTTAGGGACATTTGACACTGCTGAAGAAGCTGCTAGAGCTTATGATCGTGCAGCCATTGCTTTGAGGGGTGCTCTTGCAATCCTTAATTTTCCTCATGAGTTCCATTCTCATCTCCCTTTCATTTCATCATCATCGTCTTCTTCTTGTTCTTCTACTGGTGTCATTGGAAGTTCTTCTAGTGCACAACAAGGGGAAGTTATTGAGTTTGAATATTTGGATGACAAGGTGTTGGAAGACCTTCTTGAGTTAGAGGAGAAGAGAGGGAAGAAAGAATAA 414 0.4469 MEEARKGEQEKERGEEEVKYRGVRKRPWGKFGAEIRDPTKPTGRQWLGTFDTAEEAARAYDRAAIALRGALAILNFPHEFHSHLPFISSSSSSSCSSTGVIGSSSSAQQGEVIEFEYLDDKVLEDLLELEEKRGKKE* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0453 137 PANTHER DNA-BINDING DOMAIN 1 132 IPR044808 GO:0003700|GO:0009873
Gso9g0453 137 MobiDBLite consensus disorder prediction 87 107 - -
Gso9g0453 137 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Gso9g0453 137 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Gso9g0453 137 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Gso9g0453 137 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Gso9g0453 137 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Gso9g0453 137 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Gso9g0453 137 PANTHER ETHYLENE RESPONSE FACTOR 1 132 - -
Gso9g0453 137 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
Gso9g0453 137 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0453 Gso-Chr9 4593755 4594276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0453 15 133 AP2-EREBP Transcription Factor Family AT3G23230 58.871 1.42e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso9g0453 AP2 8.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0453 - - gmx:100807295 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1310 15 13508397 13508802 Gso9g0453 9 4593755 4594276 GST