Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0452 ATGGAGAAAGAGAGAGGAGAGGAAGAAGTGAAGTACCGTGGAGTGAGAAAGAGGCCATGGGGTAAGTTCGGAGCAGAGATCAGAGACCCAACAAAACCTACGGGAAGGCAATGGTTAGGGACATTTGACACTGCTGAAGAAGCTGCTAGAGCTTATGATCGTGCAGCCATTGCTTTGAGGGGTGCTCTTGCAATCCTTAATTTTCCTCATGAGTTCCATTCTCATCTCCCTTTTATATTATCAAATTCTTCTACTAAGGGAAATGGAAGTTCTTTTGATAAGGAAGTTATTGAGTTAGAGTATTTGGATGACAAGGTGTTGGAAGAGCTTCTTGAGTTAGAAGAGAAGAGAAGGAATAACGAAGACTAA 369 0.4228 MEKERGEEEVKYRGVRKRPWGKFGAEIRDPTKPTGRQWLGTFDTAEEAARAYDRAAIALRGALAILNFPHEFHSHLPFILSNSSTKGNGSSFDKEVIELEYLDDKVLEELLELEEKRRNNED* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0452 122 CDD AP2 11 70 IPR001471 GO:0003700|GO:0006355
Gso9g0452 122 Pfam AP2 domain 11 61 IPR001471 GO:0003700|GO:0006355
Gso9g0452 122 Gene3D AP2/ERF domain 10 70 IPR036955 GO:0003700|GO:0006355
Gso9g0452 122 PANTHER ETHYLENE RESPONSE FACTOR 2 116 - -
Gso9g0452 122 PRINTS Ethylene responsive element binding protein signature 12 23 IPR001471 GO:0003700|GO:0006355
Gso9g0452 122 PRINTS Ethylene responsive element binding protein signature 35 51 IPR001471 GO:0003700|GO:0006355
Gso9g0452 122 ProSiteProfiles AP2/ERF domain profile. 11 69 IPR001471 GO:0003700|GO:0006355
Gso9g0452 122 PANTHER DNA-BINDING DOMAIN 2 116 IPR044808 GO:0003700|GO:0009873
Gso9g0452 122 SUPERFAMILY DNA-binding domain 11 71 IPR016177 GO:0003677
Gso9g0452 122 Coils Coil 103 122 - -
Gso9g0452 122 SMART rav1_2 11 75 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0452 Gso-Chr9 4577350 4577977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0452 7 118 AP2-EREBP Transcription Factor Family AT3G23230 55.200 3.65e-39 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gso9g0452 AP2 6.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0452 - - gmx:100500521 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1309 15 13500134 13500572 Gso9g0452 9 4577350 4577977 GST