Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0445 ATGGTGAAGTTTCTGAAACCAAACAAGGCCGTCATTGTCCTTCAGGGACGCTACGCCGGCAAGAAAGCCGTGATCGTTCGAACCTTCGACGAAGGAACTCGCGAGCGCCCCTACGGCCACTGTTTGGTGGCGGGGATAAAGAAGTACCCTGCGAAGGTGATCAAGAAGGACTCGGCGAAGAAGACGGCGAAGAAGTCGCGCGTGAAGGCGTTCGTGAAGCTCGTCAACTACCAGCACCTCATGCCCACGCGCTACACGCTTGACGTGGACTTGAAGGACGCGGTTAACCCCGACGTTCTCAACGCGAAGGATAAGAAGGTCACTGCTCTCAAGGAGACCAAGAAGCGCCTCGAGGAGAGGTTCAAAACCGGGAAGAACCGGTGGTTCTTCACCAAGCTCAGGTTCTGA 408 0.5588 MVKFLKPNKAVIVLQGRYAGKKAVIVRTFDEGTRERPYGHCLVAGIKKYPAKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVNPDVLNAKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0445 135 Pfam Ribosomal L27e protein family 52 135 IPR001141 GO:0003735|GO:0005840|GO:0006412
Gso9g0445 135 SMART kow_9 4 31 IPR005824 -
Gso9g0445 135 CDD KOW_RPL27 6 88 IPR041991 -
Gso9g0445 135 SUPERFAMILY Translation proteins SH3-like domain 2 135 IPR008991 -
Gso9g0445 135 Coils Coil 100 127 - -
Gso9g0445 135 PANTHER 60S RIBOSOMAL PROTEIN L27 1 135 - -
Gso9g0445 135 ProSitePatterns Ribosomal protein L27e signature. 124 135 IPR018262 GO:0003735|GO:0005840|GO:0006412
Gso9g0445 135 Gene3D - 1 135 IPR038655 -
Gso9g0445 135 PANTHER 60S RIBOSOMAL PROTEIN L27 1 135 IPR001141 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0445 Gso-Chr9 4461945 4462654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0445 1 135 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 81.481 5.69e-80 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0445 K02901 - gmx:100799485 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1301 15 13364827 13365479 Gso9g0445 9 4461945 4462654 GST