Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0444 ATGGCGCCGGGAATCAGAGGCCTGCAGCTGACTTCCCTCGCCGGCGACTCCGATGAGCTCGAGGACGTGCGGCTCTTGGACTCCTACGACGAAATCGACGGCGGAGCGAGGCGGATTCAGGTGTCGGTCACCGGAATGACCTGCGCCGCTTGCTCCAATTCCGTCGAATCAGCTCTCAAATCACTCGACGGAGTCATCAGCGCCTCTGTCGCGTTGCTTCAGAACAAAGCCGACGTCGTTTTCAATTCGGCTCTGCTCAAGGATGAAGACATAAAAAATGCAATTGAAGATGCTGGGTTTGAAGCAGACATATTACCTGAATCCAGTACAGTTGCACATGAAACCCTGGTGGGACAGTTCACAATTGGAGGTATGACATGTGCAGCATGTGTAAATTCTGTTGAAGGTATTTTAAGAAATCTTCCAGGGGTCAAAAGGGCTGTTGTAGCTTTGGCTACTTCATCAGGTGAAGTTGAATATGATCCCAGTGTAATTAGTAAAGATGATATAGTCAACGCAATTGAAGATTCTGGTTTTGATGGTTCATTTATAGAAAGCAATGAGCAGGATAAAATAATTTTAGGGGTGGTTGGTGTGTACAGTCTGATCGACACACAAGTTTTAGAAGGCATTCTTAGCAGCACAAAAGGAGTAAGGCAGTTTCATTTTGACAAGGTTTCAGGTGAATTGGATGTTCTGTTTGATCCTGAAGTTCTCAGTTCTAGATCCGTAGTTGATGCAATCCAGGAGGGAAGCAATGGAAAGTTTAAATTACATGTTAGAAGCCCTTATACAAGAATGGCTTCTAAAGACGTTGAGGAGATCTCAACCATATTTCGGCTCTTCATCTCCAGTCTGTTTCTTAGTATTCCTCTCTTCTTCATGAGGGTAGTTTGTCCTCATATTCCACCATTCTATTCCTTGTTACTTTGGCGATGTGGGCCTTTCCTCATGGGTGATTTGTTGAAATGGGCATTGGTGAGTGTCATCCAATTTGTGATTGGCAAGCGCTTCTACATTGCAGCCGGCAGAGCTCTTCGAAATGGTTCTACAAACATGGATGTCCTGGTTGCTGTGGGAACTACTGCTTCCTACATTTATTCTGTTTGTGCTCTTCTATATGGTGCTCTTACTGGATTTTGGTCTCCAACTTACTTTGAAACAAGTGCTATGCTCATAACATTTGTATTGTTGGGCAAGTATTTGGAATGCCTTGCCAAGGGAAAGACATCTGATGCTATCAAGAAATTAGTAGAACTTGCTCCTGCAACAGCTTTACTAGTTGTTAAAGATAAAGGCGGTAAATCTATTGAAGAAAGGGAAATTGATTCTTTGCTTGTTCAACCTGGGGACACATTGAAAGTTCTTCCTGGTGCAAAGGTTCCTGCTGATGGTATTGTTACTTGGGGATCAAGTTATGTAAATGAGAGCATGGTAACTGGTGAATCTGTACCTATTATGAAGGAGGTGAATGCTTCCGTTATTGGAGGCACAATAAATTTGCATGGCGTCCTTCACGTAGAAGCTACCAAAGTAGGATCTGATACAGTTTTGAGTCAGATTATTAGTTTGGTTGAGATGGCCCAGATGTCCAAAGCTCCCATCCAGAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCTACGGTTGTTTCTTTAGCATTATTGACACTATTGGGTTGGTATGTTGCTGGGTCTATTGGAGCTTACCCAGAAGAATGGCTGCCAGAAAATGGAAATCACTTTGTTCTTGCCCTAATGTTCGCAATATCTGTAGTAGTGATTGCATGTCCCTGTGCACTTGGCTTGGCAACACCAACAGCTGTCATGGTGGCAACAGGGGTTGGGGCTAACAATGGAGTGTTAATTAAAGGAGGAGATGCCTTGGAAAGGGCTCAGAGGGTGAAGTATGTGATATTTGATAAAACAGGCACTCTAACTCAGGGAAAAGCCACTGTTACTGCTGCCAAGACATTCACAGGAATGGAACGTGGAGAATTTCTTAAATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTAGCAAAAGCAATTTTAGCATATGCACGCCATTTTCATTTCTTTGATGACTCTTCTGCTACTACTGGTACCGAGAATGATGCCAAAACTGATGCAAAGTCTGGGTGGCTTTTTGATGTCTCAGACTTCTTTGCTCTTCCTGGAAGAGGTGTTCAATGTTTTATAGATGGGAAGCATATTTTGGTTGGTAACAGGAAGTTGATGGAGGAAAATGGCATAGATATTTCAACAGAAGTCGAAAATTTTGTGGTAGAGCTGGAAGAAAGTGCAAAGACAGGGATACTGGTAGCATATAATGATATATTAACTGGAGCCTTGGGGATTGCAGACCCACTAAAGAGAGAGGCTGCTGTAGTCATAGAGGGCCTCCAGAAAATGGGTGTCAAACCTGTTATGGTTACAGGAGATAACTGGAGAACAGCTCGCGCTGTTGCCAAGGAGGTTGGCATCCAAGATGTTAGGGCAGAGGTTATGCCAGCAGGAAAAGCTGACGTTGTACGTTCATTCCAAAAAGATGGGAGCATAGTTGCAATGGTGGGTGATGGTATCAATGATTCTCCTGCATTAGCTGCTGCTGATGTTGGTATGGCGATTGGGGCAGGAACTGACATTGCAATAGAAGCTGCTGAGTATGTCCTCATGAGAAATAGCTTGGAAGATGTAATCACAGCCATCGATCTTTCACGGAAGACCTTTACTCGTATTCGATTGAATTACGTGTTTGCCATGGCTTACAATGTTGTGGCTATACCAGTTGCTGCTGGTGTGTTTTATCCTTCACTGGGGATCAAGCTGCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCTTCTGTAAGTGTCGTATGCTCTTCTTTGCTTCTCAAAAGATATAGAAGACCCAGACTTACTACAATACTTGAAATAGTTGTAGAATAA 2961 0.4374 MAPGIRGLQLTSLAGDSDELEDVRLLDSYDEIDGGARRIQVSVTGMTCAACSNSVESALKSLDGVISASVALLQNKADVVFNSALLKDEDIKNAIEDAGFEADILPESSTVAHETLVGQFTIGGMTCAACVNSVEGILRNLPGVKRAVVALATSSGEVEYDPSVISKDDIVNAIEDSGFDGSFIESNEQDKIILGVVGVYSLIDTQVLEGILSSTKGVRQFHFDKVSGELDVLFDPEVLSSRSVVDAIQEGSNGKFKLHVRSPYTRMASKDVEEISTIFRLFISSLFLSIPLFFMRVVCPHIPPFYSLLLWRCGPFLMGDLLKWALVSVIQFVIGKRFYIAAGRALRNGSTNMDVLVAVGTTASYIYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGGKSIEEREIDSLLVQPGDTLKVLPGAKVPADGIVTWGSSYVNESMVTGESVPIMKEVNASVIGGTINLHGVLHVEATKVGSDTVLSQIISLVEMAQMSKAPIQKFADYVASIFVPTVVSLALLTLLGWYVAGSIGAYPEEWLPENGNHFVLALMFAISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQRVKYVIFDKTGTLTQGKATVTAAKTFTGMERGEFLKLVASAEASSEHPLAKAILAYARHFHFFDDSSATTGTENDAKTDAKSGWLFDVSDFFALPGRGVQCFIDGKHILVGNRKLMEENGIDISTEVENFVVELEESAKTGILVAYNDILTGALGIADPLKREAAVVIEGLQKMGVKPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAAEYVLMRNSLEDVITAIDLSRKTFTRIRLNYVFAMAYNVVAIPVAAGVFYPSLGIKLPPWVAGACMALSSVSVVCSSLLLKRYRRPRLTTILEIVVE* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0444 986 CDD HMA 119 180 IPR006121 GO:0046872
Gso9g0444 986 TIGRFAM TIGR00003: copper ion binding protein 39 102 IPR006122 GO:0005507
Gso9g0444 986 TIGRFAM TIGR00003: copper ion binding protein 119 180 IPR006122 GO:0005507
Gso9g0444 986 SUPERFAMILY HMA, heavy metal-associated domain 116 188 IPR036163 GO:0046872
Gso9g0444 986 ProSitePatterns Heavy-metal-associated domain. 122 151 IPR017969 GO:0046872
Gso9g0444 986 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 392 661 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso9g0444 986 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 739 942 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso9g0444 986 PANTHER ATP7, ISOFORM B 11 979 - -
Gso9g0444 986 PRINTS Copper-transporting ATPase 1 signature 38 63 - -
Gso9g0444 986 PRINTS Copper-transporting ATPase 1 signature 64 87 - -
Gso9g0444 986 PRINTS Copper-transporting ATPase 1 signature 140 161 - -
Gso9g0444 986 SFLD p-type atpase 621 912 IPR044492 -
Gso9g0444 986 Gene3D - 650 793 IPR023299 GO:0000166
Gso9g0444 986 ProSitePatterns E1-E2 ATPases phosphorylation site. 641 647 IPR018303 -
Gso9g0444 986 ProSiteProfiles Heavy-metal-associated domain profile. 117 183 IPR006121 GO:0046872
Gso9g0444 986 SUPERFAMILY HAD-like 638 966 IPR036412 -
Gso9g0444 986 PRINTS P-type cation-transporting ATPase superfamily signature 475 489 - -
Gso9g0444 986 PRINTS P-type cation-transporting ATPase superfamily signature 639 653 - -
Gso9g0444 986 PRINTS P-type cation-transporting ATPase superfamily signature 785 796 - -
Gso9g0444 986 PRINTS P-type cation-transporting ATPase superfamily signature 807 817 - -
Gso9g0444 986 PRINTS P-type cation-transporting ATPase superfamily signature 860 879 - -
Gso9g0444 986 PRINTS P-type cation-transporting ATPase superfamily signature 883 895 - -
Gso9g0444 986 SFLD C1.7: P-type atpase like 621 912 - -
Gso9g0444 986 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 353 969 IPR027256 GO:0006812|GO:0016021|GO:0019829
Gso9g0444 986 ProSiteProfiles Heavy-metal-associated domain profile. 38 104 IPR006121 GO:0046872
Gso9g0444 986 Gene3D - 118 183 - -
Gso9g0444 986 ProSitePatterns Heavy-metal-associated domain. 43 73 IPR017969 GO:0046872
Gso9g0444 986 Gene3D - 630 910 IPR023214 -
Gso9g0444 986 Pfam haloacid dehalogenase-like hydrolase 635 874 - -
Gso9g0444 986 Gene3D - 36 107 - -
Gso9g0444 986 CDD HMA 40 102 IPR006121 GO:0046872
Gso9g0444 986 Gene3D - 407 529 - -
Gso9g0444 986 SUPERFAMILY HMA, heavy metal-associated domain 35 107 IPR036163 GO:0046872
Gso9g0444 986 SUPERFAMILY Calcium ATPase, transmembrane domain M 372 934 IPR023298 -
Gso9g0444 986 Pfam Heavy-metal-associated domain 41 101 IPR006121 GO:0046872
Gso9g0444 986 Pfam Heavy-metal-associated domain 120 180 IPR006121 GO:0046872
Gso9g0444 986 SUPERFAMILY Calcium ATPase, transduction domain A 439 525 IPR008250 -
Gso9g0444 986 PANTHER HEAVY METAL P-TYPE ATPASE 11 979 - -
Gso9g0444 986 Pfam E1-E2 ATPase 422 618 - -
Gso9g0444 986 CDD P-type_ATPase_Cu-like 280 956 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0444 Gso-Chr9 4444679 4452836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0444 1 986 Primary Pumps ATPases AT5G44790 75.025 0.0 1513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0444 K17686 - gmx:100798969 1880.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1300 15 13347564 13355231 Gso9g0444 9 4444679 4452836 GST