Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0431 ATGAAGTGTTTTTCTCTCTTGTTATTTGCATTTTGGTCTATATATATCCACCTGTTTTCTCTCTTTTCATTGAACTCACTATGGTTTATCTCAAACATAACTGTTTTTGCATCAGGAAATGAGATTGATCATTTGGCACTGATAAATTTCAAGAAATTCATATCTACTGATCCATATGGAATCTTGTTCTCTTGGAATACTTCTACTCATTTTTGTAATTGGCATGGAATCACATGCAATCTCATGCTCCAAAGAGTTACAGAGTTAAACTTGCAAGGATACAAGTTGAAGGGATCCATATCTCCGCACGTAGGCAATCTCTCTTACATGACAAACTTCAACCTTGAAGGCAACAACTTCTACGAGAAAATCCCAAAAGAATTGGGACGGTTGTCACGATTACAGAAACTCTCTATCGAAAACAACTCATTGGGAGGGGAAATTCCTACAAACTTGACAGGTTGTACTCATCTCAAACTCTTGAACTTAGGTGGGAACAATTTGACTGGCAAAATACCGATCGAAATTGGCTCACTTCAGAAGCTTACATATTTGAGCCTTTATATGAATCAATTAACTGGAGGAATCCCATCATTCATAGGGAATCTTTCATCCTTAATTGTTTTCTCAGTGGATACTAACAACTTAGAGGGAGATATTCCGCAGGAAATATGCCATCTCAAAAACTTGACAGAGGTAGAATTGGGTATCAACAAACTGAGTGGGACATTGCCTTCATGTCTTTATAATATGTCATCTCTCACTACAATCTCAGCTTCAGTAAATCAACTTAGAGGCTCTCTTCCACCCAACATGTTCCACACCCTTCCCAATCTCCAAGAACTTTATATTGGTGGCAATCATATCTCAGGGCCAATCCCACCTTCCATCACAAATGCATCTGCCCTCTTAGTACTTGACATCAATTCAAACAATTTCATAGGACAAGTTCCAAGTCTGAGGAAGCTACAAGATCTTCAACGTCTATCTTTGCCTGTGAACAATCTAGGTAACAATTCAACTAATGGTTTGGAGTTCATAAAATCATTGGCAAATTGTAGTAAGTTGCAAATGTTAGCTATATCCTACAATGATTTTGGAGGTCATTTGCCAAATTCCTTGGGCAATTTATCCACCCAGCTTAGTCAACTATATCTCGGAGGTAATTGGATATCAGGAGAAATCCCTGCATCAATAGGAAATCTAATTGGCTTAACTCTCTTGGGGATAGAAGATAACCTCATTGATGGGATTATCCCAATAACTTTTGGGAAGCTTCAGAAGATGCAAAAGTTAGACTTAGGCACAAACAAGCTGTCAGGAGAGATAGGAACCTTTTTAAGAAACCTTAGTCAATTGTTTTATTTGGGTTTGGGAGATAATATGTTAGAAGGAAATATTCCTCCAAGCATAGGAAATTGCCAAAAGTTACAATATCTAGGTCTTTGGCAAAACAACCTTAAAGGAACCATACCCTTAGAAATTTTTAATCTTTCCTCTCTAACAAATGTGTTGGATTTGTCACAGAACTCATTGAGTGGGATTATACCGGAAGAAGTGGGCATCCTTAAACATGTAGATTTGCTAAATTTGTCTGAAAATCATTTGTCTGGTCGCATTCCTGAAACTATCGGAGAATGCATAATGTTAGAGTACCTATATTTGCAAGGGAATTCCTTATATGGAATCATACCATCCTCTTTGGCTTCACTGATTGGTCTAATAGAATTAGACCTCTCAAAAAATCGCTTGTCTGGAACAATTCCTGATGTTCTGCAAAATATTTCTGTTTTGGAATTGTTGAATGTATCTTTTAACATGTTGGATGGTGAGGTACCAACTGAAGGTGTCTTTCAAAATGCAAGTGGGTTAGGGGTGATCGGAAATAGTAAACTTTGTGGAGGCATTTCAGAACTGCATCTACCACCATGCCGTATCAAAGGTAAAAAACTTGCAAAACACCACAAGTTCAGGATGATAGCAATTTTAGTTAGTGTGGTTGCTTTTCTTGTCATACTTTCAATTATTCTAACTATCTACTGGATGAGAAAGAGGAGTAACAAACCATCTATGGATTCTCCAACAATTGACCAGCTGGCTAAAGTTTCATACCAAATCCTACACAATGGAACTAATGGATTCTCGACTACACAATTGATAGGGTCTGGAAATTTTAGCTCTGTCTACAAAGGAACACTTGAGTTAGAAGACAAAGTTGTTGCCATTAAGGTCCTAAACCTTCAAAAGAAAGGAGCTCACAAGAGTTTCATTGTTGAATGCAATGCACTTAAAAATATTAAGCATCGAAATCTAGTTCAGATTTTAACATGTTGTTCCAGCACAGATTATAAAGGTCAAGAATTTAAAGCTCTAATTTTTGAGTACATGAAAAATGGAAGCTTAGACCAATGGTTGCATCCAAGGACTCTAAGTGCAGAGCATCCAAGAACATTAAACCTTGATCAAAGATTAAATATCATGATTGATGTTGCTTTTGCAATACATTATCTTCATTATGAATGTGAGCAATCGATCATTCATTGTGATTTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGATTGCTCATGTAAGTGATTTTGGCATAGCAAGACTTCTTTCAACCATTAATGGTACCACTTCTAAGGAAACAAGTACAATTGGAATAAGGGGGACTGTTGGCTATGCTCCTCCAGAGTATGGAGTGAGTTCTGAGGTGTCTATGAATGGTGACATGTACAGTTTAGGGATTCTTATTTTGGAGATGCTCACCGGAAGAAGACCCACAGATGAAATCTTTGAAGATGGTAAAAATTTGCATAACTTTGTGGAAAATTCATTTCCTGATAATCTTTTACAAATTTTGGACCCATCACTTGTACCTAAACATGAAGAAGCAACAATAGAAGAAGAAAACATTCAGAATCTTACTCCAACTGTTGAGAAGTGCTTAGTTTCACTCTTTAAAATTGGACTTGCTTGTTCAGTGCAATCACCAAGAGAAAGAATGAATATGGTTTATGTCACTAGAGAGCTAAGCAAAATCAGAAAATTCTTTCTCGCTGGTCTGAGATCAAATGCCACAGCTATTTCAGTCAGAAACTGA 3108 0.37 MKCFSLLLFAFWSIYIHLFSLFSLNSLWFISNITVFASGNEIDHLALINFKKFISTDPYGILFSWNTSTHFCNWHGITCNLMLQRVTELNLQGYKLKGSISPHVGNLSYMTNFNLEGNNFYEKIPKELGRLSRLQKLSIENNSLGGEIPTNLTGCTHLKLLNLGGNNLTGKIPIEIGSLQKLTYLSLYMNQLTGGIPSFIGNLSSLIVFSVDTNNLEGDIPQEICHLKNLTEVELGINKLSGTLPSCLYNMSSLTTISASVNQLRGSLPPNMFHTLPNLQELYIGGNHISGPIPPSITNASALLVLDINSNNFIGQVPSLRKLQDLQRLSLPVNNLGNNSTNGLEFIKSLANCSKLQMLAISYNDFGGHLPNSLGNLSTQLSQLYLGGNWISGEIPASIGNLIGLTLLGIEDNLIDGIIPITFGKLQKMQKLDLGTNKLSGEIGTFLRNLSQLFYLGLGDNMLEGNIPPSIGNCQKLQYLGLWQNNLKGTIPLEIFNLSSLTNVLDLSQNSLSGIIPEEVGILKHVDLLNLSENHLSGRIPETIGECIMLEYLYLQGNSLYGIIPSSLASLIGLIELDLSKNRLSGTIPDVLQNISVLELLNVSFNMLDGEVPTEGVFQNASGLGVIGNSKLCGGISELHLPPCRIKGKKLAKHHKFRMIAILVSVVAFLVILSIILTIYWMRKRSNKPSMDSPTIDQLAKVSYQILHNGTNGFSTTQLIGSGNFSSVYKGTLELEDKVVAIKVLNLQKKGAHKSFIVECNALKNIKHRNLVQILTCCSSTDYKGQEFKALIFEYMKNGSLDQWLHPRTLSAEHPRTLNLDQRLNIMIDVAFAIHYLHYECEQSIIHCDLKPSNVLLDDDMIAHVSDFGIARLLSTINGTTSKETSTIGIRGTVGYAPPEYGVSSEVSMNGDMYSLGILILEMLTGRRPTDEIFEDGKNLHNFVENSFPDNLLQILDPSLVPKHEEATIEEENIQNLTPTVEKCLVSLFKIGLACSVQSPRERMNMVYVTRELSKIRKFFLAGLRSNATAISVRN* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0431 1035 Gene3D Ribonuclease Inhibitor 40 322 IPR032675 -
Gso9g0431 1035 Pfam Leucine rich repeat 404 463 IPR001611 GO:0005515
Gso9g0431 1035 Pfam Leucine rich repeat 132 192 IPR001611 GO:0005515
Gso9g0431 1035 Pfam Leucine rich repeat 550 608 IPR001611 GO:0005515
Gso9g0431 1035 Pfam Leucine rich repeat 229 289 IPR001611 GO:0005515
Gso9g0431 1035 SUPERFAMILY L domain-like 379 634 - -
Gso9g0431 1035 Pfam Protein kinase domain 715 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0431 1035 Gene3D Phosphorylase Kinase; domain 1 695 795 - -
Gso9g0431 1035 SUPERFAMILY Protein kinase-like (PK-like) 687 1013 IPR011009 -
Gso9g0431 1035 SUPERFAMILY L domain-like 42 336 - -
Gso9g0431 1035 Pfam Leucine rich repeat N-terminal domain 43 80 IPR013210 -
Gso9g0431 1035 PANTHER OS04G0122200 PROTEIN 28 1023 - -
Gso9g0431 1035 ProSiteProfiles Protein kinase domain profile. 714 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0431 1035 Gene3D Transferase(Phosphotransferase) domain 1 796 1022 - -
Gso9g0431 1035 SMART LRR_typ_2 450 474 IPR003591 -
Gso9g0431 1035 SMART LRR_typ_2 523 547 IPR003591 -
Gso9g0431 1035 SMART LRR_typ_2 571 594 IPR003591 -
Gso9g0431 1035 SMART LRR_typ_2 179 203 IPR003591 -
Gso9g0431 1035 SMART LRR_typ_2 131 155 IPR003591 -
Gso9g0431 1035 SMART LRR_typ_2 251 275 IPR003591 -
Gso9g0431 1035 SMART LRR_typ_2 276 300 IPR003591 -
Gso9g0431 1035 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Gso9g0431 1035 Gene3D Ribonuclease Inhibitor 335 645 IPR032675 -
Gso9g0431 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Gso9g0431 1035 SMART LRR_sd22_2 131 154 - -
Gso9g0431 1035 SMART LRR_sd22_2 378 404 - -
Gso9g0431 1035 SMART LRR_sd22_2 426 452 - -
Gso9g0431 1035 SMART LRR_sd22_2 276 302 - -
Gso9g0431 1035 SMART LRR_sd22_2 179 205 - -
Gso9g0431 1035 SMART LRR_sd22_2 571 597 - -
Gso9g0431 1035 SMART LRR_sd22_2 227 253 - -
Gso9g0431 1035 SMART serkin_6 714 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0431 1035 PANTHER LRR RECEPTOR-LIKE KINASE 28 1023 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0431 Gso-Chr9 4300175 4304075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0431 40 1026 Receptor kinase-like Gene Family AT3G47570 44.589 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gso9g0431 Pkinase 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0431 - - gmx:100801459 2035.77