Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0426 ATGTCTCAACCTGAGTCGTCCCTGGCTTCTACCTTAGCAGAAACCTCTTTGGTAAAGCAAGAGTGTGATATTAGTGATCCTGTTCATGATTTTGCTTCAAGTGATTCAGAGATGGAAGCAAAACGAATAGCAAAGGTTGCTAATCTTGCTATGGCAGAACTCCTTAAGCTTATGAGGATTAATGAGCCTTTATGGGCCAAGTCTTCATATGGTGTGCCGGGATATGTTCTCGTTCGTGAAAGATATGCAAGCATGTTTCCTAGGGTTGATAGCTTGAATAGTCCTCCTCACACTACTCGTGAAGAATCTTCAAAATATTGTAGAGTAGTGAGAATTAGAGCGAGGAAATTGGTTGAGATGCTTTTGGATTCGGAGGAATGGGTTAATCATTTCCCAACAATAGTTTCAAAATCAGAAACAGTCAAAGTGCTTGATGTGGGTTCATTGGAGAATCGAAATGGAGCATTGCAAGTGGTGTGTGAAAAAATGCAGGCTATTTCACCGCTAGTGTCGTCTCGAGAATTATTCTTCCTTCGTTATTGTCAGCAAGTTACAGATGGTACATGGGCCATAGCTCATGTGTCGATTGATTCAATTGAAGGGCGTGTTCTTGATTCTCCAGTTCGGAGGCTTCCATCTGGCTGCGTTATTTATCAAATGAATGAAGAATTTTCCATGGTTATTTGGGCTGAGCACGTGGAAGTGAATGAAAGGATTGCTACATGCTCACGAGGAGGTTTTACTCGTGACAATGTTGCATATGGAGCTGAAAGGTGGCTTTGGGCACTTAATAGAATGTGTGAGAGGTTTGTTTGGACTTCAATAAACAACATGCCCCCTCAAGCATCTCCAGAAGAGGTGAAGGGATTCAATGCAAGGATGAGGGCCATGAGGTTTTCTAATCGAATGGTTCAAGGATTTTTTGGTGTTTTGTATAAGTTACGTGATGGTGGCCTTGCACAATCTTTAGAGGAAAACAACACCGAGATTAAGATCTCTCTCCGGAAGAACACAACACCAGGCATGCCAGAAGGCATAATTGCCACTGCCATCACTTGCATCAGGCTCCCTGTCCCTCAACAGAATTGGGATGTTCTGAGCGGTGGATTTGCAGTAAATGAGTTTAGTCATTTCACAATGGGTGGAAGAAATTGTATTTCAATTTTGAAGACTTATAACCGAATAGAGGGCGATGTGTTGATGTTTCAAGATAGTTATATTGATCCTATGGGATCGTATATGGTTTATGCTCCAATTTCTGAAAAAAACATGAGCATGATTATGAATGGGGGAGATTCAATGGTTTCAATTCTTCCTTCGGGATTTCTGATATCTGAAGATCACAGTGGTACAGTTGCTGAATCATCTAATAGACCAAGAGGCTCAGTGTTAACAATGGCTTACCAATTATTGATTTGTAGCAACAATAACACATCAATTCAAGATCAAAACAGGAAAACTGTGGTTAGAATTGTCGTCTCAGCACTCCAAAACATTAAGACTTCTTTGAAAATGTCTGAGGATTAG 1527 0.4086 MSQPESSLASTLAETSLVKQECDISDPVHDFASSDSEMEAKRIAKVANLAMAELLKLMRINEPLWAKSSYGVPGYVLVRERYASMFPRVDSLNSPPHTTREESSKYCRVVRIRARKLVEMLLDSEEWVNHFPTIVSKSETVKVLDVGSLENRNGALQVVCEKMQAISPLVSSRELFFLRYCQQVTDGTWAIAHVSIDSIEGRVLDSPVRRLPSGCVIYQMNEEFSMVIWAEHVEVNERIATCSRGGFTRDNVAYGAERWLWALNRMCERFVWTSINNMPPQASPEEVKGFNARMRAMRFSNRMVQGFFGVLYKLRDGGLAQSLEENNTEIKISLRKNTTPGMPEGIIATAITCIRLPVPQQNWDVLSGGFAVNEFSHFTMGGRNCISILKTYNRIEGDVLMFQDSYIDPMGSYMVYAPISEKNMSMIMNGGDSMVSILPSGFLISEDHSGTVAESSNRPRGSVLTMAYQLLICSNNNTSIQDQNRKTVVRIVVSALQNIKTSLKMSED* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0426 508 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 21 505 IPR042160 -
Gso9g0426 508 SUPERFAMILY Bet v1-like 38 269 - -
Gso9g0426 508 Gene3D - 88 244 IPR023393 -
Gso9g0426 508 SMART START_1 45 269 IPR002913 GO:0008289
Gso9g0426 508 ProSiteProfiles START domain profile. 36 272 IPR002913 GO:0008289
Gso9g0426 508 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 21 505 - -
Gso9g0426 508 Pfam START domain 47 269 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0426 Gso-Chr9 4248273 4251917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0426 36 503 Homeobox Transcription Factor Family AT4G04890 32.470 1.93e-75 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0426 K09338 - gmx:102667038 1008.82