Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0416 ATGTCAGACTCTTTCCTCTCATTGCTTATTCTCTTGGTTCTTTACATTTTTTCAGCCTCAGCCCAACCTTATGAAGACTATGACGACAAGTCATCCCTTTACTCCACAAAAAGTGACACTGTCTTCTCTCTCGAAGTCCCAACATTAGATGAAACCACCTTTGATAATCTCCTATCCTTTGGTTACTACCGTAAAACCTGCCCCCAATTCGAGTCCATCCTACACAACAAAGTCAAAGAATGGATCCTGAAGGACTACACTCTAGCAGCTAGTCTCATGAGGCTCCACTTCCATGATTGCTCTGTCAGGGGATGTGATGGTTCCATTCTGTTGAAGCATGATGGAAGCGAGAGGACAGCACATGCTAGCAAGACACTGAGAGGGTTTGAAGTGGTGGATGATATCAAGGCAGAGTTAGAGAAACAGTGCCCCAAGACTGTGTCTTGTGCTGACATTCTCACTGCTGCTGCAAGGGATGCCACGTTTGAGTTAGGTGGGCCTTATTGGGCTGTTCCTTATGGTAGGAAAGATGGGAAGGTATCCATTGCTAAGGAAGCTGATATGGTGCCTATGGGCCATGAAAACATTACTTCCTTGATTGAGTTTTTCCAATCCAGGGGCATGACAGTGCTTGACTTGGTTGTTCTCTCAGGGGCTCATACCATTGGAAGAATTTCATGTGGCTCCATTCAATACAGGCTGTACAACTACCAAGGAACAGGCAAACCAGACCCAACCCTAGATCCCAAGTATGTAAACTTCTTGCAAAGTAAGTGTAGATGGGCCTCAGAGTATGTGGATCTTGATGCTACAACACCAAAGACCTTTGACAATGTTTACTACATTAATCTCCAAAAGAAAATGGGGTTGTTATCTACTGATCAGTTGCTATACTCTGATCCAAGGACTTCTCCCCTTGTTTCTGCATTGATTGCTTCTCACTCAGTTTTTGAGCACCAGTTTGCTGTGTCCATGGGAAAGCTTGGCATTGTTGATGTTCTCACAGACCAGGATGAAGGAGAAATCAGGACCAACTGCAATTTTGTCAATGCTTATTGA 1059 0.4429 MSDSFLSLLILLVLYIFSASAQPYEDYDDKSSLYSTKSDTVFSLEVPTLDETTFDNLLSFGYYRKTCPQFESILHNKVKEWILKDYTLAASLMRLHFHDCSVRGCDGSILLKHDGSERTAHASKTLRGFEVVDDIKAELEKQCPKTVSCADILTAAARDATFELGGPYWAVPYGRKDGKVSIAKEADMVPMGHENITSLIEFFQSRGMTVLDLVVLSGAHTIGRISCGSIQYRLYNYQGTGKPDPTLDPKYVNFLQSKCRWASEYVDLDATTPKTFDNVYYINLQKKMGLLSTDQLLYSDPRTSPLVSALIASHSVFEHQFAVSMGKLGIVDVLTDQDEGEIRTNCNFVNAY* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0416 352 Gene3D Peroxidase, domain 2 190 328 - -
Gso9g0416 352 ProSitePatterns Peroxidases active site signature. 89 100 IPR019794 GO:0004601
Gso9g0416 352 Gene3D - 61 350 - -
Gso9g0416 352 CDD secretory_peroxidase 58 349 IPR033905 GO:0004601|GO:0042744
Gso9g0416 352 SUPERFAMILY Heme-dependent peroxidases 58 350 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 212 222 IPR019793 -
Gso9g0416 352 PRINTS Haem peroxidase superfamily signature 89 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Haem peroxidase superfamily signature 147 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Haem peroxidase superfamily signature 165 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Haem peroxidase superfamily signature 212 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Haem peroxidase superfamily signature 269 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PANTHER PEROXIDASE 25-RELATED 50 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 ProSiteProfiles Plant heme peroxidase family profile. 57 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 Pfam Peroxidase 76 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Plant peroxidase signature 67 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Plant peroxidase signature 91 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Plant peroxidase signature 127 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Plant peroxidase signature 146 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Plant peroxidase signature 165 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Plant peroxidase signature 211 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Plant peroxidase signature 267 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Plant peroxidase signature 283 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PRINTS Plant peroxidase signature 323 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g0416 352 PANTHER PEROXIDASE 50 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0416 Gso-Chr9 4116886 4118892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0416 54 351 Peroxidase AT1G30870 59.333 1.00e-129 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0416 K00430 - gmx:100527587 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1282 15 13102418 13104583 Gso9g0416 9 4116886 4118892 GST