Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0399 ATGGTTGCTTTCCTGCGACCCTTGCAAAAGAGTAAGTCCAAGTTTCAATTTTTACTCTCAAAAGGTGTTTCTAGCTCTACAATTGTTGACATAGTGAGTAAGTCCCCTGCAATACTGAGTCGAAGCCTGGAGAATACTATAGTCCCAAGCTATGATTTGGTATTTAGATTCTTGAAATCTGATGACCACACTATTTCTTGTTTGTTTGGTAATTGCATTTTCTATGGCAGAAGAGATTACATCGAGCGCAACATCAGAGTTTTGCTTGATAATGGAGTGGGAGAAACAAACATTGCAAGATTGCTTCGGAACCGTTGTAGGGCGGTTTTCACCTCTGATATTCTTAAGGTGGTGGAGGAAGTAAAGGATCTGGGGTTTGATCCTTCAAAATCACCTTTTGTTACAGCATTGCTTGCCCTAAAAAGTATGAGTCAAACCTCGTGGAAGGAGAAAGTTGGCGTCTATAAGAAATGGGGTTGGTCCGATGAAGCCTGTCTTGAAGCATTTAGGAGGCGCCCTCACTGTATGTTGGCATCCATTGACAAAATAAATACTGTGATGAACTTTTGGGTCAATCAGTTGGGCTGGGATTCTTTGGACCTTGTCCGATCTCCCAAGATTCTTGGGTTGAGTATGGAAAAAACAATCATTCCAAGGGCTCTTGTTGTCCAGTATTTAGTCGCGAAAGGCTTGAGGAAAAAGAGTGCCTGCTTTCATATCCCATTTGCTGTTTCCAAAAAGGCGTTTATGGAAAAGTATGTGATATGTTATAAGGAGGACGCACATCAACTATTAAAGCTGTACCAGGAAAAAAATAGTGTTCAAGGAAAAAATGAGGATTGTGCAGCATCTGGCAGTTATCAAGTGGTTAACTCATGA 879 0.4107 MVAFLRPLQKSKSKFQFLLSKGVSSSTIVDIVSKSPAILSRSLENTIVPSYDLVFRFLKSDDHTISCLFGNCIFYGRRDYIERNIRVLLDNGVGETNIARLLRNRCRAVFTSDILKVVEEVKDLGFDPSKSPFVTALLALKSMSQTSWKEKVGVYKKWGWSDEACLEAFRRRPHCMLASIDKINTVMNFWVNQLGWDSLDLVRSPKILGLSMEKTIIPRALVVQYLVAKGLRKKSACFHIPFAVSKKAFMEKYVICYKEDAHQLLKLYQEKNSVQGKNEDCAASGSYQVVNS* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0399 292 Pfam mTERF 10 175 IPR003690 GO:0003690|GO:0006355
Gso9g0399 292 Pfam mTERF 143 237 IPR003690 GO:0003690|GO:0006355
Gso9g0399 292 Gene3D Transcription termination factor 3, mitochondrial 71 267 IPR038538 -
Gso9g0399 292 SMART mt_12 29 60 IPR003690 GO:0003690|GO:0006355
Gso9g0399 292 SMART mt_12 198 232 IPR003690 GO:0003690|GO:0006355
Gso9g0399 292 SMART mt_12 99 127 IPR003690 GO:0003690|GO:0006355
Gso9g0399 292 SMART mt_12 166 197 IPR003690 GO:0003690|GO:0006355
Gso9g0399 292 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 13 276 - -
Gso9g0399 292 PANTHER CGI-12 PROTEIN-RELATED 13 276 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0399 Gso-Chr9 3876386 3877264 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso9g0399 mTERF 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0399 K15032 - gmx:102663414 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1263 15 12802923 12806318 Gso9g0399 9 3876386 3877264 GST