Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0390 ATGGGAACTGATGATACAAAATGCACTTTCCAGGAGATGAGCATGCTTAGTCCTGAAGGTGAACTGAAAATAAGTTTTGGCTATCAATGCAATAGTGATAGAGCTATATCTTGTAATGAAATCCAAAGAACAAGCAGTTTCTCTTGGTTGTCTGGTGCTGCCTTAAGTGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTAATAGGAGAAGAAATCCTTCCGAGTTTGGACTCTCCTAAATCGTTTCGTAGGGTGCCCTCTTCACCAAGTTTTCCAAAGTTGGACATGTTATCATCTTCTGTCAATAGTAGTTTGTCAAACCTAAGTTGCAGCCCATCCACCCCAAGTAATATGCTTGAATATGACCCTTTTACGTTAAGATCCATAAGTGCTCCTTCCAGAAGTGAAGGTTTTCTTAATGGCATGGAAGTTCAAGTTGCTGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAGATGGGTGGCTCTTCTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCAGCTGACTTTCTGGCCGGCACCCTTTATGACAGTATCATATCTTATTTTAACATGTTATACTGGGATTTGGAACCAGATTCCCTAAAAGCTTCTAACAATGAGAGTATGGGTGGATCCTTTCAATATAATTTTAATGATAGTCTTAATCTTCAGGAGCGTCAATCTCTGTCAAAAATTAAGGGAAACAATTCTAGTCTTGACTGTTTTGCAAACAATATTCCACATTCCAAGTCGAAAGCATCTCCTAAATCATTTTCACAAACTACAGTACTTGATGGCCTCCAACATGTTCTTAGTCAGGTTGAGAATGATTTCCTATACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCGATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGATTTGTACACACTTAATCTAGGCGACAGTAGAGCAGTGTTGGCAACATGCATCACAGATAACAGTTTGAATGCGAATGAGAGATTGAAGGCTATCCAACTTACAGAGAGTCACACTGTTGACAATGAAGCTGAAAGAGCTCGACTTCTTGCTGATCATCCTGATGATCCTAAAACCATAGTAGCAGGGAAAGTGAAGGGAAAACTGAAGGTTACAAGAGCTTTAGGAGTGGGCTACCTGAAAAAGAAAATTCTGAATGACGCATTGATGGGAATCCTTCGAGTTCGTGATCTTAAAAGCCCGCCATATGTTTCTACTGATCCATCATTGAATGTGCACAAAATCTCAGATTCTGATCAATTTGTTATAGTTGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAAGCAGTACAGCTTGTAGAGTCTTATATCTTGAGAAACCCTTTTGGTGATCCAGCAAAATTTCTTATTGAGCAACTAGTTGCAAGAGCAGCTGATTCTGCAGGCTTCAGCATGGAAGAGTTGATGAATGTTCCGGATGGGAGGAGGAGGAAGTACCATGATGATGTGACCGTAATGGTGATCATCCTTGGGATGAATCAACGGACTTCAAAAGCATCAATTTGCCTCTAG 1590 0.4044 MGTDDTKCTFQEMSMLSPEGELKISFGYQCNSDRAISCNEIQRTSSFSWLSGAALSANATLANTNICNGVIGEEILPSLDSPKSFRRVPSSPSFPKLDMLSSSVNSSLSNLSCSPSTPSNMLEYDPFTLRSISAPSRSEGFLNGMEVQVAGGAAGEDRVQAVCSEEDGWLFCAIYDGFNGRDAADFLAGTLYDSIISYFNMLYWDLEPDSLKASNNESMGGSFQYNFNDSLNLQERQSLSKIKGNNSSLDCFANNIPHSKSKASPKSFSQTTVLDGLQHVLSQVENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCITDNSLNANERLKAIQLTESHTVDNEAERARLLADHPDDPKTIVAGKVKGKLKVTRALGVGYLKKKILNDALMGILRVRDLKSPPYVSTDPSLNVHKISDSDQFVIVGSDGLFDFFSNDEAVQLVESYILRNPFGDPAKFLIEQLVARAADSAGFSMEELMNVPDGRRRKYHDDVTVMVIILGMNQRTSKASICL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0390 529 Gene3D - 129 525 IPR036457 -
Gso9g0390 529 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 12 528 - -
Gso9g0390 529 PANTHER PROTEIN PHOSPHATASE 2C 12 528 IPR015655 GO:0004722|GO:0006470
Gso9g0390 529 SUPERFAMILY PP2C-like 154 517 IPR036457 -
Gso9g0390 529 ProSiteProfiles PPM-type phosphatase domain profile. 142 516 IPR001932 -
Gso9g0390 529 SMART PP2C_4 132 514 IPR001932 -
Gso9g0390 529 CDD PP2Cc 154 516 IPR001932 -
Gso9g0390 529 Pfam Protein phosphatase 2C 257 471 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0390 Gso-Chr9 3800431 3804333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0390 18 526 PP2C-type Phosphatase Gene Family AT3G16560 61.069 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0390 - - gmx:100791404 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2097 7 44842069 44845675 Gso9g0390 9 3800431 3804333 PCT
Gso17g0205 17 1915763 1919304 Gso9g0390 9 3800431 3804333 PCT
Gso9g0390 9 3800431 3804333 Gso7g2097 7 44842069 44845675 PCT
Gso9g0390 9 3800431 3804333 Gso17g0205 17 1915763 1919304 PCT