Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0386 ATGGAGGATTCTGCGGCGCAGAAGAGGAAGCAGCGAGAGTTTGCGCTAGCGTCGGTTTCCGAGGTGTCTTCGGCTCCTTCTTCTGCTTCGCCGGGGGTTTCTCTCTTCGCCGGTGATCGTCTTCAAATTCTGAACGAATCTCGCCATGTTGCTCTCAATGCTTATCTTTCAGCTATTCAGCTATTCAGATTAGGTCCTATTGAATCGGTTTGCATGGTGGAAGAGTCTGAAGCTGACAAACAGACGTCATATTCCAGTGGAGTTGCTATACAGTTTAGAAATGAGGAAGAGAGTGAGGCCTTCCATTGTGTATACCAACAATGGAAGAAAGGATTCAATGTTCAAGGAGGGAACTTGCCAAATGGAACTAATGCAATAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGTCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTATTATGCTGCAGTTCTTGAGAATCGTGCAGATTTCGTAGGTCGTGTAGTAATTGATGTTGGTGCTGGTAGTGGTATTTTGTCACTATTTGCTGCCCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGAAAACTCATAGCTGGGAACCCAATTCTGGGTCAACGAATTACAGTCATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCTGATATTCTAATCTCTGAGCCCATGGGCACCTTGTTAGTTAACGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACTCCTAATGGGAAAATGTTTCCTACAGTGGGAAGGATTCACATGGCTCCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAATAAGGCCCTGTTTTGGCGGCAACAAAATTATTATGGTGTTGATTTGACGCCCTTACATGGGACTGCCTTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGGTTGTTAATAGCTGCTCCTATGTTCCATGTGTTAGACTTTACCAAAATAAAGGAAGAAGAGCTGTATGAAATTGACATTCCTCTCAAATTCACAGCCACTGTGGGTGCCAGGCTACATGGGTTGGCATGCTGGTTTGATGTACTGTTCAATGGAAGTACTGCACGAAGGTGGCTTACCACTGCCCCTGGTTCACCTACAACCCACTGGTATCAGTTACGCTGTGTTCTCTCACAGCCAATATATGTCATGGCAGGACAAGAAATCACTGGCAGGATGCACTTGATTGCTCACACTGCTCAGAGTTATACAATCTATTTAAAATTGTCAGCTAAAACGTGGGGTCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATCTCAAAGAACCTTACTATAGAATGTCTCAACTGCAAGCTTATCCATTAGCCCAAGATCAGCAACCTCAACCACTTTTACAGACACAGGATATACACATCCAATCTCAAGAGTTGGATGAAGTGGAGATGATGCAACAGCCTTCTACTAAGTCGTGTGCTCAGATTGACTCCCTCATGCAGAATGCATCATAA 1614 0.4306 MEDSAAQKRKQREFALASVSEVSSAPSSASPGVSLFAGDRLQILNESRHVALNAYLSAIQLFRLGPIESVCMVEESEADKQTSYSSGVAIQFRNEEESEAFHCVYQQWKKGFNVQGGNLPNGTNAITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVLENRADFVGRVVIDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPTVGRIHMAPFSDEYLFVEIANKALFWRQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAAPMFHVLDFTKIKEEELYEIDIPLKFTATVGARLHGLACWFDVLFNGSTARRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRMHLIAHTAQSYTIYLKLSAKTWGPGAEQGGILQTSSCKLDLKEPYYRMSQLQAYPLAQDQQPQPLLQTQDIHIQSQELDEVEMMQQPSTKSCAQIDSLMQNAS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0386 537 CDD AdoMet_MTases 183 286 - -
Gso9g0386 537 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 458 IPR029063 -
Gso9g0386 537 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 137 452 IPR025799 GO:0016274|GO:0018216
Gso9g0386 537 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 1 492 - -
Gso9g0386 537 Gene3D Vaccinia Virus protein VP39 123 284 IPR029063 -
Gso9g0386 537 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 492 IPR025799 GO:0016274|GO:0018216
Gso9g0386 537 Pfam Ribosomal protein L11 methyltransferase (PrmA) 180 252 - -
Gso9g0386 537 Gene3D - 286 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0386 Gso-Chr9 3762731 3771295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0386 144 452 C2H2 Transcription Factor Family AT3G12270 32.938 1.38e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0386 K05931 - gmx:100809620 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2091 7 44804491 44812881 Gso9g0386 9 3762731 3771295 PCT
Gso17g0209 17 1943787 1952069 Gso9g0386 9 3762731 3771295 PCT
Gso9g0386 9 3762731 3771295 Gso7g2091 7 44804491 44812881 PCT
Gso9g0386 9 3762731 3771295 Gso17g0209 17 1943787 1952069 PCT