Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0379 ATGGAAGGTAACAAGGACGAAGCATTACGCTGCGTTCGCATCGCCGAAGAAGCCATCGCGTCGAGAAACAAAGACCGCGCCCTCAAATTCCTCAAAATCGCGCAACGTCTCAACCGCGATTTGCCCCTCCAATCCCTGCTCGACAAGTGCAACCGCCTCGATTCTCACACCGCCTCCACCGCAGGCGGCAGCGGCGCCTCTCTGGCGAACGGCCACTCTCCTCGTCGCGAGGGCTTAGACGTGGAAAGAAATTACACGGAGGAAAACGTGCACTTAATTAGGGAAATCAAAGGAAAGAGCGATTATTACGCGATTCTAGGATTAGAGAAGAGTTGCTCCGTGGAAGAGATTCGAAAAGCGTATCGGAAGCTCTCTCTCAAAGTTCATCCCGATAAGAACAAAGCTCCAGGCTCCGAAGACGCGTTCAAGAAGGTTTCCAAGGCTTTCAAGTGTTTGAGCGACGACGGTTCCAGAAGGATGTACGACCAAACCGGAACCGCCGCCGACGATTTCGAGAGCACCGAGGTAAACACGTTCCGGCGTAGAAGAAGAAGAACGGCGACGACGCGCGATTTCTTCGAAGACGAGTTCGATCCGGACGAGATATTCAGGGCGTTCTTCGGACACTCCGACGTGTTCGGAAGAAACAACCACGTTTACCGAACCCGCGGCGGGATGGGGAATCCGAATCATCAGCATAGGCATGAATTCAATGCTGGAGGATCGGGAGGGAGGCATCACAATGTGATGCTTCTGATTCAGCTCTTGCCGTTTTTGATTATTGTGCTGCTCGCGTACTTGCCGTTTTCGGAGCCTGAGTATTCCTTGCACAAGCATTACAGCTACCAGATTCCGAAGACCACGGATCGGCACGGGGTTCAGTTCTTCGTGAAGTCGGCGGCGTTTGATGTGAATTATCCGCCCGGGAGTGATGCTCGTGAGGCAGTTGAGGAGAGTGTGATGAAGGATTATAGGAGTATGCTGAGAAGATACTGTCAGGTGGAGATGCAGAGACGGAGCTGGAATAGGAATCTGCCAGCTCCTCACTGTGATAAGCTGCATAACTTTGCAGTGATGGCATGA 1083 0.5254 MEGNKDEALRCVRIAEEAIASRNKDRALKFLKIAQRLNRDLPLQSLLDKCNRLDSHTASTAGGSGASLANGHSPRREGLDVERNYTEENVHLIREIKGKSDYYAILGLEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRRMYDQTGTAADDFESTEVNTFRRRRRRTATTRDFFEDEFDPDEIFRAFFGHSDVFGRNNHVYRTRGGMGNPNHQHRHEFNAGGSGGRHHNVMLLIQLLPFLIIVLLAYLPFSEPEYSLHKHYSYQIPKTTDRHGVQFFVKSAAFDVNYPPGSDAREAVEESVMKDYRSMLRRYCQVEMQRRSWNRNLPAPHCDKLHNFAVMA* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0379 360 MobiDBLite consensus disorder prediction 58 79 - -
Gso9g0379 360 PANTHER AT29763P-RELATED 1 358 - -
Gso9g0379 360 PANTHER CHAPERONE PROTEIN DNAJ 49 1 358 - -
Gso9g0379 360 SUPERFAMILY Chaperone J-domain 97 212 IPR036869 -
Gso9g0379 360 ProSiteProfiles dnaJ domain profile. 101 165 IPR001623 -
Gso9g0379 360 Pfam DnaJ domain 101 162 IPR001623 -
Gso9g0379 360 Gene3D DnaJ domain 98 219 IPR036869 -
Gso9g0379 360 Pfam Domain of unknown function (DUF1977) 270 340 IPR015399 -
Gso9g0379 360 PRINTS DnaJ domain signature 103 121 IPR001623 -
Gso9g0379 360 PRINTS DnaJ domain signature 121 136 IPR001623 -
Gso9g0379 360 PRINTS DnaJ domain signature 137 157 IPR001623 -
Gso9g0379 360 PRINTS DnaJ domain signature 157 176 IPR001623 -
Gso9g0379 360 CDD DnaJ 101 154 IPR001623 -
Gso9g0379 360 SMART dnaj_3 100 157 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0379 Gso-Chr9 3694797 3700971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0379 4 162 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 26.994 2.62e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0379 K09518 - gmx:100789271 689.493