Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0353 ATGGCGACGGAGCAGTTAATGTCCTCCGCCGGCGGCGGCAGCTCTCGCTACGTCCAAATGAAATCGTCTCCGCCGCCGTCGCCGCCGGCCGCGGCGGCCGAGGAGATTTCCTCGGTCCCGTCGTTCCGGCACAGCGGCGCCGAGGCCAATCGGATTTTCGAGGAATTGCCCAAAGCCGCCATCGTCTCCGTCTCTCGGCCCGACGCCAGCGACATCAGCCCCATGCAACTCTCTTACACAATTCAGGTTCAGTACAAACAGTTCAAGTGGGAGCTAACAAAGAAAGCCCATCAAGTATTTATTTTGCATTTCGCGCTAAAGAAACGTGCTTTTATTGAGGAAATCCACGAGAAACAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAACACACTGCTATGGCGCAAGATGACGACGAAGGTGATGATGAGACTGTCCCGTTGCATACTGAAGAAACTCATGAAAGTGCCAAGGACAGAGATGTTCCATCTAGTGCTGCTCTGCCAATTATACGGCCAGCCTTGGGAAGACAGCATTCTATTGCAGACAGGGCAAAGAGAGCAATGCAAGGATATCTGAATCACTTTTTGGGAAATATCAGTATTGTGAACTCTCGTGAGGTTTGCAAGTTCTTGGAGGTATCGAAGTTATCTTTTTCACCTGAATATGGTCCTAAGCTGAAGGAAGAATATGTGATGGTGAAGCATCTACCCAAAATCCAGAAGGATGATGATTCCAGGAAGTGTTGTTTGTCTGACTGTTTTAGTTGCTGTAATGACAACTGGCAAAAGGTATGGGCTGTACTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTCGATACACAGCCTCTAGACATCATTGTTTTTGATGTACTGCCTGCCTCAGATGGGAATGGGGATGGTCGACTATCGCTGGCGAGTGAAATGAAGGAACGAAATCCTTTACGTCATTCATTCAAGGTGACTTGTGGAATCCGGAGCATCAGAATTAGAGTGAAAAGTAGTAGTAAAGTTAAAGATTGGGTTGCTGCAATTAACGATGCTGGACTCAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGTTATGGTTCATTTGCTCCTCCAAGAGGCCTAGTTGAAGACGGAAGTCAAGCCCAGTGGTTCATTGATGGGCGAGCAGCATTTGAGGCCATTGCTTTTTCAATTGAGGCTGCAAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTCCACACTCATGCTTCGTCAAGGCTTGATAATTTGCTGGAAGCAAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCGCATCATGAAAAACTAGTCATTATTGATAACCATATTTGCTTTATTGGAGGACTTGATTTGTGCTTTGGTCGTTATGACACATCTGAGCATAAAGTGGGAGATTTCCCTCCTCTAACCTGGCCTGGAAAAGACTATTATAACCCAAGAGAATCTGAGCCAAATTCATGGGAAGATACAATGAAAGATGAATTAGAACGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGCCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCCAAGAGGAACAAAGCTCCATATGAGCAAGCAATTCCATTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCAGAGAGATACAGATTGAAAGTAGGAACACTGACAATCATAGAGTTCTCAAGAGAGAAGATTCATTTTCCTTATCTTCCCAAGACCAAGATATTCCTCTACTTTTGCCTCAGGAGTCTGATGGGTTGGATACTCATGAAGGAGACCAAAAATTGAATGGGGTAATCTCCTTTTCACATCACCTTGACAAGCCAAGAAGGATCAGCAGTGGTCTTCCGTTCTCGTTCCGGAAGGCCAAAATTGTAGCAGTTGGTCCAGATACACCAATGAAGGGCTTTGTAGATGATCTAGATTCTGAGCATGGTCTTGAGAAAATGTCTCTGGATAGAGTGGCTCATTTTGATTTACAAAGTACAAAGCCACAATGGTGGGAAACGCAAGAACGGGGTGACCAAGGAGGTTTTGCTGAAGAATCAGGACAAGTTGGTCCTCTTGCTTCCTGCCGTTGCCAAGTTATTAGGAGTGTGAGTCAATGGTCTGCTGGAACAAGTCAAACCGAAGAGAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCTGAATACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCTGGAGATGAGATGATACGGAATCGTGTGTTAGAAGCTTTATATCGACGGATTATGCGAGCTTACAATGACAAAAAATCTTTCAGGGTTATAGTTGTCATACCTCTCCTGCCTGGCTTCCAGGGTGGTCTTGATGATAGTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCCGAGGGCAGAATTCTATCATGCATAATCTTTATGAACTTCTTGGTTCTAAAATACATGACTACATCTCTTTTTATGGCCTAAGGTCTTATGGTAGACTCTCTAATGGTGGCCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATTACTTTGATTGGATCTGCTAATATTAATGATAGGAGCTTACTTGGCTCCAGAGATTCTGAGATTGGTATAGTTTTAGAAGACAGAGAGTTTATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCAGGAAAGTTTTCCTTGACCCTCCGATTGTCATTATGGTCTGAACACTTGGGTCTCCCTATAGGAGAGGTCAATCAAATAATGGACCCAGTCGTTGAATCTACTTACAGGGATATTTGGATGGCAACAGCAAAGACAAATACTACAATTTACCAGGATGTCTTTTCTTGCGTACCTAATGATCTGATACACACCAGACTTGCTTTCAGACAAAGTGTGGCTTTCTGGAAAGAAAGAATTGGTCACACGACCATTGATTTAGGAATAGCCCCAGAAAAATTAGAATCCTATTATGACGGAGGCATTACAAACACCGATCCCTTGGAGAGATTAGCATCAGTGAAGGGTCATCTCGTTTCCTTTCCCTTGGAATTCATGTGTCAGGAAAGTCTAAGACCTGCTTTTAATGAAAGCGAATACTACGCTACTCAAGTTTTCCATTGA 3381 0.4389 MATEQLMSSAGGGSSRYVQMKSSPPPSPPAAAAEEISSVPSFRHSGAEANRIFEELPKAAIVSVSRPDASDISPMQLSYTIQVQYKQFKWELTKKAHQVFILHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHTAMAQDDDEGDDETVPLHTEETHESAKDRDVPSSAALPIIRPALGRQHSIADRAKRAMQGYLNHFLGNISIVNSREVCKFLEVSKLSFSPEYGPKLKEEYVMVKHLPKIQKDDDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPASDGNGDGRLSLASEMKERNPLRHSFKVTCGIRSIRIRVKSSSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLVEDGSQAQWFIDGRAAFEAIAFSIEAAKSEIFICGWWLCPELYLRRPFHTHASSRLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIIDNHICFIGGLDLCFGRYDTSEHKVGDFPPLTWPGKDYYNPRESEPNSWEDTMKDELEREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGRSREIQIESRNTDNHRVLKREDSFSLSSQDQDIPLLLPQESDGLDTHEGDQKLNGVISFSHHLDKPRRISSGLPFSFRKAKIVAVGPDTPMKGFVDDLDSEHGLEKMSLDRVAHFDLQSTKPQWWETQERGDQGGFAEESGQVGPLASCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYNDKKSFRVIVVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSIMHNLYELLGSKIHDYISFYGLRSYGRLSNGGPVATSQVYVHSKIMIVDDCITLIGSANINDRSLLGSRDSEIGIVLEDREFIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPIGEVNQIMDPVVESTYRDIWMATAKTNTTIYQDVFSCVPNDLIHTRLAFRQSVAFWKERIGHTTIDLGIAPEKLESYYDGGITNTDPLERLASVKGHLVSFPLEFMCQESLRPAFNESEYYATQVFH* 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0353 1126 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 923 950 IPR001736 GO:0003824
Gso9g0353 1126 MobiDBLite consensus disorder prediction 138 165 - -
Gso9g0353 1126 SUPERFAMILY Phospholipase D/nuclease 763 974 - -
Gso9g0353 1126 Pfam Phospholipase D Active site motif 490 517 IPR001736 GO:0003824
Gso9g0353 1126 Gene3D Endonuclease Chain A 747 983 - -
Gso9g0353 1126 Gene3D Endonuclease Chain A 377 613 - -
Gso9g0353 1126 SMART PH_update 229 357 IPR001849 -
Gso9g0353 1126 Pfam PLD-like domain 796 970 IPR025202 -
Gso9g0353 1126 CDD PLDc_vPLD1_2_yPLD_like_2 783 967 - -
Gso9g0353 1126 Gene3D - 258 355 IPR011993 -
Gso9g0353 1126 SUPERFAMILY PH domain-like 261 353 - -
Gso9g0353 1126 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 490 517 IPR001736 GO:0003824
Gso9g0353 1126 PANTHER PHOSPHOLIPASE 42 1123 - -
Gso9g0353 1126 SMART pld_4 490 517 IPR001736 GO:0003824
Gso9g0353 1126 SMART pld_4 923 950 IPR001736 GO:0003824
Gso9g0353 1126 CDD PLDc_vPLD1_2_yPLD_like_1 383 527 - -
Gso9g0353 1126 PANTHER PHOSPHOLIPASE D 42 1123 IPR015679 -
Gso9g0353 1126 SUPERFAMILY Phospholipase D/nuclease 341 610 - -
Gso9g0353 1126 MobiDBLite consensus disorder prediction 1 36 - -
Gso9g0353 1126 Coils Coil 108 128 - -
Gso9g0353 1126 MobiDBLite consensus disorder prediction 1 21 - -
Gso9g0353 1126 CDD PH_PLD 206 353 - -
Gso9g0353 1126 PIRSF PLD_euk 43 636 IPR016555 GO:0004630|GO:0006654|GO:0048017
Gso9g0353 1126 PIRSF PLD_euk 620 1126 IPR016555 GO:0004630|GO:0006654|GO:0048017
Gso9g0353 1126 MobiDBLite consensus disorder prediction 150 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0353 Gso-Chr9 3414988 3427841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0353 1 1007 Phospholipase D Gene Family (Wang group) AT3G16785 72.547 0.0 1410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0353 K01115 - gmx:100782187 2266.89