Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0350 ATGGGGAGAAGAATGGGACAAGATCAATCAGATTACAAGACCCAGTTGGTGTTGGAGGTTTGCTCCATTTCCACACGTTCAGTTGTGTGTGTTCATAGACATGTCTCAAACCATGCTAAGCCATCTTTCATAGATTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGATGAACACCATTCGCAAGCAATACCATAAACTTGCCTTGCAACTTCATCCGGACAAGAATACACACCCAAAGGCTGAAATTGCATTCAAGCTTGTCTCTGAGGCACATATATGTCTGTCTGATGCTGCAAAAAGGAAAGCTTTTGACTTAAAGAGACATAAGAATTTCTGCTTTGAGTGCAATAGAATCCCTTATAGTACATCCAAACATGTCCCTGGCAATTCCAATTGTTCAACTTTCAAGACATGGAATATCATTAGGGACTCAAGATCTTACAAAGTTTTGAGATATATTAGAGACATGAGAGAAAGACTGAAGGAGGAGACCAAGGTGATAGAGAACTGTCTGCGAAAAAATTCAATGTCAAAGAAAGAATCTCCCCTCTACAATCCAGATGACTATAGACATGGAAGCAGCTTCAAGCATAAAGATGAGAAAGAAATCCCTATTTTCAATCCATTGAAATACTTGTACAAAGGATACCCTCATCTGAGGTGCAATGTTTACAAGAATTCTGAGGCGTGTTGGTACTTGCACACTCAAAATCTTGTGGACACTGACAAGGGGGAAGCCAAGTATGCATCCCCGGTTTTTGAGGTCAGATCACAAAGGAGCATGCTCACAAGAAGTAAATTTGCTTAA 813 0.4034 MGRRMGQDQSDYKTQLVLEVCSISTRSVVCVHRHVSNHAKPSFIDWYCILGVEENAGMNTIRKQYHKLALQLHPDKNTHPKAEIAFKLVSEAHICLSDAAKRKAFDLKRHKNFCFECNRIPYSTSKHVPGNSNCSTFKTWNIIRDSRSYKVLRYIRDMRERLKEETKVIENCLRKNSMSKKESPLYNPDDYRHGSSFKHKDEKEIPIFNPLKYLYKGYPHLRCNVYKNSEACWYLHTQNLVDTDKGEAKYASPVFEVRSQRSMLTRSKFA* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0350 270 SUPERFAMILY Chaperone J-domain 34 111 IPR036869 -
Gso9g0350 270 ProSiteProfiles dnaJ domain profile. 45 109 IPR001623 -
Gso9g0350 270 Gene3D DnaJ domain 44 164 IPR036869 -
Gso9g0350 270 PRINTS DnaJ domain signature 47 65 IPR001623 -
Gso9g0350 270 PRINTS DnaJ domain signature 65 80 IPR001623 -
Gso9g0350 270 PRINTS DnaJ domain signature 81 101 IPR001623 -
Gso9g0350 270 CDD DnaJ 45 98 IPR001623 -
Gso9g0350 270 Coils Coil 155 175 - -
Gso9g0350 270 PANTHER BNAC03G44070D PROTEIN 8 268 - -
Gso9g0350 270 SMART dnaj_3 44 101 IPR001623 -
Gso9g0350 270 Pfam DnaJ domain 45 106 IPR001623 -
Gso9g0350 270 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0350 Gso-Chr9 3383323 3384942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0350 45 106 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.455 3.29e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0350 - - gmx:100781104 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1219 15 12179441 12181001 Gso9g0350 9 3383323 3384942 GST
Gso7g2066 7 44593640 44595017 Gso9g0350 9 3383323 3384942 PCT
Gso17g0235 17 2164170 2165679 Gso9g0350 9 3383323 3384942 PCT
Gso9g0350 9 3383323 3384942 Gso7g2066 7 44593640 44595017 PCT
Gso9g0350 9 3383323 3384942 Gso17g0235 17 2164170 2165679 PCT