Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0337 ATGGCCTTGCATGTCCACAGCTTCTTCTATTTTTGGTTCGTCGTCATGATCTTCGTCGTCGTATTTTTCACGGCACCGTCGGTGTCTCAGCGGCAAGCCACCGGGTCCTGCAACGGGATACTCCTGTCATACGCGTATACCGGCGGCTTGCAGCTGCCTCCGAATGTCTCGGACCCGGCGGAGCAGCCGTACCGGTTCTCCTCGACATTGACGGTGCTGAACAACGGGCTGGAGGAGCTGAGGTCGTGGAGGGTGTTCGTGGGGTTTCAGCACGGCGAGTGGCTGGTGTCCGCCTCGAACGCGGTGCTCGCCGACGGCACGAGCCTCCCCGGTTCGGTGGAAAACGGCACCGTTTTGAGTGGTGAAACCGTGAGGGATCTGAAGACTGCGGTGGCGACCGCCGGGGACTTGAATCAGATGCAGGTGAGGGTAGACATGGTGGGGACCTTGCTTGGAGTGGCGCCACCCTCTGTGCCAATGCCTTCTTCTGTTACCTTGGCTAACGATGGATTCTTGTGTGGTCAACCCTCTGGTCAAGGGAGCAATGAAACTCATGTGTGTTGCACAAGCGACCCCAATTTCAAAACAAACATAACCACAGAAGAAGAGTTCCTACCCAGGCAAAAGGGTGACCTTAGCATCACATACGACATCATCAGAACCTATGACTCCGATTACTGGGCAGAGGTCACAATTGCAAACCACAACCCCTTAGGTCGTCTTGATAACTGGAGACTAAGCTGGGACTGGAACAACAACGAGTTCATCCACACAATCAAAGGTGCATATCCCTTAAACGTGGATTCCTCTGACTGTGTCTTCGGTCCACAAGGCCTGTTCTACAAGGAACTCGACTTCTCCAACGTGTTAAACTGCGAAAGAAGACCAACCATAGTTGATCTTCCTCCCACAATGTTCAACAACACAGACTTCGGTAAAATCCCGTTTTGTTGTAGGAATGGTACTATCTTGCCACCGACAATGGACCCTAGTTTGTCATCTTCAAGGTTCCAAATTCAGGTTTTCAAAATGCCACCGAACCTTAACCGTTCCAAGTTTTCACCACCTCATAATTGGGAGATAAAGGGTACCCTTAACCCTGATTATGCATGTGGGAACCCTATTAGGGTTAGTCCTAGTGAATCTCCTGATCCAACACACCCACCATCGAACAAATCCGCGATTGCAAGCTGGCAAGTGGTTTGTAACATCACAAACACAAAACGAGAAGCACGTAAATGCTGTGTTTCTTTCTCAGCTTATTACAATGAATCGGTTGTTCCATGCAACACGTGTGCATGTGGATGTAGTAACCCTGAGAGAACGTGTAGTGCAACCTCACAAGCAATGTTGCTTCCACCAGAGGCACTTCTTGTACCTTTCCAGAACAGAACCGAGAAGGCACGTGCTTGGGCTGAGATACAACACTTGAATGTCCCTAACCCTTTTCCTTGTGGTGATAACTGTGGTGTGAGCATAAACTGGCACTTGGTGACGGATCACCGGAGCGGTTGGAGTGCAAGGATCACACTCTTCAACTGGGGTGAAGCCAGTTTTGCTGATTGGTTCGCCGCGGTGCGAATGGAGAAGGCTGCAAAGGGGTTTGAGGAGGTGTATTCTTTTAATGGAAGCCTTTTGGATGGTGTGGATGGCACGATATTCATGCAAGGGAAGAAAGGGTTGAACTTTCTTGTGGCGGAGACGGATGGATCTAACCCTCGGAGAGATCCCAGGGTGCCCGGGAAACAGCAATCGGTGATCTCTTTTACAAAGAAGAATACTCCTGGAATCGATGTGGTTGGTGGTGATGGTTTTCCTAGTAAGGTTTTCTTCAATGGGGAGGAATGTTCTCTTCCTTCAGTGGTTCCAAGCAGTGGTACTAGAATGGAGGTTTCATTGGCTACTATGATGTTCTTGGTTCTGTTTTTGTGGATTCTCTTCATGCGGCAATAG 1953 0.4992 MALHVHSFFYFWFVVMIFVVVFFTAPSVSQRQATGSCNGILLSYAYTGGLQLPPNVSDPAEQPYRFSSTLTVLNNGLEELRSWRVFVGFQHGEWLVSASNAVLADGTSLPGSVENGTVLSGETVRDLKTAVATAGDLNQMQVRVDMVGTLLGVAPPSVPMPSSVTLANDGFLCGQPSGQGSNETHVCCTSDPNFKTNITTEEEFLPRQKGDLSITYDIIRTYDSDYWAEVTIANHNPLGRLDNWRLSWDWNNNEFIHTIKGAYPLNVDSSDCVFGPQGLFYKELDFSNVLNCERRPTIVDLPPTMFNNTDFGKIPFCCRNGTILPPTMDPSLSSSRFQIQVFKMPPNLNRSKFSPPHNWEIKGTLNPDYACGNPIRVSPSESPDPTHPPSNKSAIASWQVVCNITNTKREARKCCVSFSAYYNESVVPCNTCACGCSNPERTCSATSQAMLLPPEALLVPFQNRTEKARAWAEIQHLNVPNPFPCGDNCGVSINWHLVTDHRSGWSARITLFNWGEASFADWFAAVRMEKAAKGFEEVYSFNGSLLDGVDGTIFMQGKKGLNFLVAETDGSNPRRDPRVPGKQQSVISFTKKNTPGIDVVGGDGFPSKVFFNGEECSLPSVVPSSGTRMEVSLATMMFLVLFLWILFMRQ* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0337 650 PANTHER COBRA-LIKE PROTEIN 7 1 649 - -
Gso9g0337 650 PANTHER COBRA-LIKE PROTEIN 7 1 649 - -
Gso9g0337 650 SUPERFAMILY Carbohydrate-binding domain 208 257 IPR008965 GO:0030246
Gso9g0337 650 Pfam COBRA-like protein 226 405 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0337 Gso-Chr9 3277175 3279992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0337 37 633 COBRA Gene Family AT4G16120 63.516 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0337 - - gmx:100778971 1325.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2054 7 44497036 44499942 Gso9g0337 9 3277175 3279992 PCT
Gso17g0247 17 2247787 2250278 Gso9g0337 9 3277175 3279992 PCT
Gso9g0337 9 3277175 3279992 Gso7g2054 7 44497036 44499942 PCT
Gso9g0337 9 3277175 3279992 Gso17g0247 17 2247787 2250278 PCT