Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0333 ATGAGTGCTTCAGAAAACCCTATTATTGATGAGACCACTGAGGGCAAAGCTTCTTCTTCTTCTTCCCCATCCTCATCAACAACGTTAAAACTATTCGGTTTCCTATTAACCCCAGCTGGTAACATTAATAACTATGAAGATATTAATCACATGCCAGCAACTAGCACCAATATTCCTTATAATACTACTTACAAGAGTCGATTCACATGTTACTTTTGCTACCGCGAATTCGCGAATTCTCAAGCTCTTGGTGGCCATCAAAATGCGCACAAGAAAGAGCGCAAAATAGCCGCGCTTTCATCCTTCGGATACTACCATCATCATCCACGGTTCATAGCACCTTCCCCATTAATCGTGGTTCCGCACGGAGGATCATCATCATCATCATCAGGACCGTTGGTTCATCCACGTGGGGGGCCACGCCATAATCATCCTCCAATGGGTGCAAGCATGGGAGAACAACAGAATAATAATAATATTGTTGTTGATGATGCTGATGGTGATGTTGATCTTAACTTGAGTTTGGCTCACAGTACTACAACTTCCAAATTCAGGGGCAAGAAAATTGCCAAGAGGAGGAGAACTTGA 588 0.4303 MSASENPIIDETTEGKASSSSSPSSSTTLKLFGFLLTPAGNINNYEDINHMPATSTNIPYNTTYKSRFTCYFCYREFANSQALGGHQNAHKKERKIAALSSFGYYHHHPRFIAPSPLIVVPHGGSSSSSSGPLVHPRGGPRHNHPPMGASMGEQQNNNNIVVDDADGDVDLNLSLAHSTTTSKFRGKKIAKRRRT* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0333 195 PANTHER ZINC FINGER PROTEIN 5 13 178 IPR044299 GO:0010090
Gso9g0333 195 MobiDBLite consensus disorder prediction 122 164 - -
Gso9g0333 195 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
Gso9g0333 195 MobiDBLite consensus disorder prediction 1 26 - -
Gso9g0333 195 PANTHER ZINC FINGER PROTEIN 8-LIKE 13 178 - -
Gso9g0333 195 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Gso9g0333 195 SUPERFAMILY beta-beta-alpha zinc fingers 65 95 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0333 Gso-Chr9 3227542 3228129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0333 24 146 C2H2 Transcription Factor Family AT1G67030 34.646 3.82e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0333 - - gmx:102664415 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1200 15 11947429 11947986 Gso9g0333 9 3227542 3228129 GST