Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0314 ATGGAAGATTTGTACCATGTCAGTTTCACTACAGATGACAATTCTAGTTCATCCAACGACATTTTGTGGTGTACTGAGGAACTGAATGAATTGAGAAAGGTCCAATTTTCGGGAGCAGAAGATCATGGAGAGTATGGGGGAATTGACCCACTTTACTCTAATTTTGGGTTCTTCCCAGATGATCCATCAGAACAAGAAGGGTACCTTCTATCCACTGATCAACAAAAGTATCACCAGCAAGTGCAACCATCATACCATGATTATGGACAATTGGATGATAACCTTCAGTTTGACATGGTATCTCTACCACTCCAATTTGATGCTCAATATCCAACCATGGTTCCACTATGTCACACAACAAAGGACAAGCCAAACTCAAACTCAAACACCCCTTTAGCCTCACTTGACATCTTGAACAACTATGGCAAGGGCTTCAAGAGGTTACGCAATGAAGACAAAACCCTGAAGCAAGTTGATGATGTGGCTATGGCCACAACAAATGAGGGTATTATGAGAAAGCTCTCGACAGAAGATGTCATGAGGATAGCTGGGACAAGGTTCATCCAATCATCATCATCAGAGTCGGAATCTTTGCCTTTCTTGGAAACTCACCCTTTTGGTATTTACTTCTCTGGACTCTCTAATGAGGAGAAAGAGGATGTGGAACTTGCTGAGTCCCTCTTGGCTTGTGCCGAGAAAGTTGGCCACCAACAGTTTGAACGTGCAAGCAAATTGCTGAGTCGTTGCGAATCATTATCTTGCAAAACGGGGAGTCCAGTTAGGCGTATTGTTCATTACTTTGCAGAGGCACTTCGCCAGAGGATAGATAGAGCAACAGGAAGAGTTTCATACAAGGATTTGCAAAAGGGTCCTTCATTTGATCCTTTAGAGGCAACCAAGGTACTAAACCCCACTGTTGTTGCATTTTATGAAGAGCTTCCCTTTTGTCAAATTTCTGTGTTCACAGAAGTTCAAGTTATAATAGAAGATGTTGCTGAAGCAAAGAAGATTCATGTTATTGATCTTGAGATCAGAAAGGGGGTGCAGTGGACTATCCTAATGCAAGCCCTTGAGTCAAGACATGAATGTCCAATTGAGCTTCTTAAGATAACCGCTGTAGAAAGTGGAACCACTAGACACATAGCTGAGGACACTGGTGAGAGACTAAAGGATTATGCTCAAGGTTTGAACATACCCTTCTCTTACAACATTGTTATGGTATCGGATATGTTACATCTAGGAGAAGATGTTTTTGAGATTGATCCTGAGGAAACAATTGTTGTTTATTCTCATTTTGCACTTAGAACCAAGATTCAAGAATCTGGCCAGCTTGAAATCATGATGAGAGTGATTAGAATCTTGAATCCTAGTGTGATGGTGGTAGCTGAAATTGAGGCAAACCACAATTCTACATCTTTTGTAAACCGTTTCATTGAGGCTCTTTTCTTCTTTAGCACATTCTTTGATTGCCTTGAGACTTGTATGAAAGGGGATGAGGGGAATCGAATGATTGTAGAATCCCTATACTTCAGTCATGGAATAAGGAATATTGTGGCTGCAGAAGGAGCAGAAAGAGATAGTAGGAGTGTGAAGATTGATGTGTGGAGGGCCTTCTTCTCCCGCTTTGGAATGGTGGAGAAAGAATTGAGCAAATTGTGTTTATTTCAAGCGGATTTGGTGGCTAAAAGATTTCCTTCTTATAGCACGTTTGATAAGAATGGGCATTGCCTTCTTATTGGGTGGAAAGGAACACCAATCAACTCTGTTTCTGTCTGGAAATTTCTTTGA 1788 0.4116 MEDLYHVSFTTDDNSSSSNDILWCTEELNELRKVQFSGAEDHGEYGGIDPLYSNFGFFPDDPSEQEGYLLSTDQQKYHQQVQPSYHDYGQLDDNLQFDMVSLPLQFDAQYPTMVPLCHTTKDKPNSNSNTPLASLDILNNYGKGFKRLRNEDKTLKQVDDVAMATTNEGIMRKLSTEDVMRIAGTRFIQSSSSESESLPFLETHPFGIYFSGLSNEEKEDVELAESLLACAEKVGHQQFERASKLLSRCESLSCKTGSPVRRIVHYFAEALRQRIDRATGRVSYKDLQKGPSFDPLEATKVLNPTVVAFYEELPFCQISVFTEVQVIIEDVAEAKKIHVIDLEIRKGVQWTILMQALESRHECPIELLKITAVESGTTRHIAEDTGERLKDYAQGLNIPFSYNIVMVSDMLHLGEDVFEIDPEETIVVYSHFALRTKIQESGQLEIMMRVIRILNPSVMVVAEIEANHNSTSFVNRFIEALFFFSTFFDCLETCMKGDEGNRMIVESLYFSHGIRNIVAAEGAERDSRSVKIDVWRAFFSRFGMVEKELSKLCLFQADLVAKRFPSYSTFDKNGHCLLIGWKGTPINSVSVWKFL* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0314 595 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 37 593 - -
Gso9g0314 595 Pfam GRAS domain family 224 593 IPR005202 -
Gso9g0314 595 ProSiteProfiles GRAS family profile. 214 593 IPR005202 -
Gso9g0314 595 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 37 593 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0314 Gso-Chr9 2988543 2990649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0314 213 594 GRAS Transcription Factor Family AT3G03450 31.266 2.35e-56 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso9g0314 GRAS 2.4e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0314 - - gmx:100818523 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1182 15 11650214 11652397 Gso9g0314 9 2988543 2990649 GST