Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0311 ATGAAAAACCAAATCTCTTTCCTCACCCTGTTTTCCATAAACTTGCTTCTTTGCTTTGCACTAGGTCCATGCACGCGTACATGCGCTTTTGCCCTAGAGGCTGAGGCAAAGCCTCCAGTCGGGTTTTCACGTTCAGAAACTCCAAACAGTGAAAGCCCCACATCACAGCCTCCAGTCGGGTTCTCACGTTCAGAGTTTACGAACAGTGAAAACCCGACATCATCATCGTCCGAGAAAGAAGAGTCAGAGTCTTCTTCCTCGGGCGATCATCCCTACATGTCGTTCTCGAGCGCCTTCGCGGACATCCTCAAGGGAACCCTCCGCGGCCACACCATCACCATGCCGGATCACGATCCGAAGGCCAGCCACCACCGCTCTGTGAAAGATATCTGCTCCCACACGGACTACCCGGAGGTGTGCGTGTCCACCATCACGCCGTTCGTCGGCAACGACTTAGACCTCATGAACGTCCTCGAGGCCGCCATCAAGGCCTGCTCCTTCCAGGCCAACTTCACCATCTCCGTCGTCGCCAAGCACATGAAGGCCTCGCCGGAGATGGCCGCCGCGCTCGAGGACTGCAAGGAGCAGTACACCAGCGCCCTGGAGAACCTCCACAGAGCCATGGAGGCTATTCCGTCCCGCGATCTCGGCACCGTTACGGTTATGCTCAGCGCTGTTTTGGCGGATGTTTCTGCGTGCGAGAGTGGGTTTGAGGAGCAAAAGACTGCATTGCCCATGCCTCATTCCGAAGGCATGGTTAGCATTACTGCCAGTATTTGTCTTTCCATTGCTTCGTTGATTCCCTATTAG 810 0.5519 MKNQISFLTLFSINLLLCFALGPCTRTCAFALEAEAKPPVGFSRSETPNSESPTSQPPVGFSRSEFTNSENPTSSSSEKEESESSSSGDHPYMSFSSAFADILKGTLRGHTITMPDHDPKASHHRSVKDICSHTDYPEVCVSTITPFVGNDLDLMNVLEAAIKACSFQANFTISVVAKHMKASPEMAAALEDCKEQYTSALENLHRAMEAIPSRDLGTVTVMLSAVLADVSACESGFEEQKTALPMPHSEGMVSITASICLSIASLIPY* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0311 269 Gene3D Invertase/pectin methylesterase inhibitor family protein 123 268 IPR035513 -
Gso9g0311 269 Coils Coil 190 210 - -
Gso9g0311 269 CDD PMEI-like_2 126 267 - -
Gso9g0311 269 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 126 267 IPR035513 -
Gso9g0311 269 MobiDBLite consensus disorder prediction 39 90 - -
Gso9g0311 269 Pfam Plant invertase/pectin methylesterase inhibitor 126 263 IPR006501 GO:0004857
Gso9g0311 269 PANTHER PECTINESTERASE INHIBITOR-LIKE 112 267 - -
Gso9g0311 269 MobiDBLite consensus disorder prediction 43 90 - -
Gso9g0311 269 PANTHER PECTINESTERASE INHIBITOR-LIKE 112 267 - -
Gso9g0311 269 SMART PMEI_2 122 263 IPR006501 GO:0004857
Gso9g0311 269 TIGRFAM PME_inhib: pectinesterase inhibitor domain 121 264 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0311 Gso-Chr9 2976175 2977190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0311 122 237 Carbohydrate Esterase AT3G14310 27.907 6.66e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0311 - - gmx:102664156 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1180 15 11627406 11628356 Gso9g0311 9 2976175 2977190 GST