Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0308 ATGGTTGACCGTACAAAGAGCAAGGTTCTTATCAGAGAATATAATGAAGATAAAGATGCTAAAATGGTGAGAAAACTAGAGAGGAACTGTGAGGGTGGAACCAAAAAGGTGGTCTCCATTTTTACCAACATGACGGGTGACCCTTTATCTAGGATTAGGTTTTTCCCCCTTCATGTTATGCTGGTAGCTGAGCTTCTTGACACAAGGGAGCTTGTTGGAGTGGTTCGGGGAATCATTAAGAATATGGGCACTCTTTCTGGGTCATTCTTGAAAATGGGTTGTATCTTAGGCCTCAGAGTCTCTCCTACTTACAGGAGAAAAGGGGTTGCACTAAGACTTGTGACCGCAGCTGAAGAATGGATGGTGAGAAATGGAGCTGAGTATGCATTCTTAGCGACTGAAAAGAACAATGGTGCATCTAAAAACCTATTCACCATCAAATGCAACTATGTGAATCTCAGCTCACTTGTCATATTTGTCCAACCAACTAGTTCCCTTACAAAGCAAATTTCCACGGATATAAAAATAGAGAAAGTGGACATAGATCTAGCAATTTCGTTGTACAGAAGAACCATGAGGACCAAAGATTTGTATCCATTGGACATGGATGTTATTCTGAAGGAGAAACTCAGCTTAGGAACATGGGTATGCTACTACAAAGAAGAGGGATGGCTCAACTTGCGGAGCAAGGTAAATAATGAAGATCTTATTAATAACAATGAAACCTCAAGATCATGGGTCATATTTAGCATATGGAACACTTGTGAAGCTTATAAGCTTCAAGTTAGAAAGTCTCAACTACTAAGGTTTCTTCTTACAACCTTAAATCATGCAAGAGAGAAAGTTTTCCCTTGTCTCAAAATGTGGGTTAGTAGTAGTGACTCACTTTGTAGACCTTTTGGGTTTCTCTTCATCTATGGAATCTATGGAGAGGGAGTGAACCTTGGAGAGCTCATGGAATCCATGTGGAGATTCACATCAAGAGTAGGAGAAGCAATGAGGGACTGCAGGGTTGTTATAACTGAGTTAGGGTTCGGTGATCCACTTGCTAACCATGTTCCTCAAACAGATTCTATGTCATGTATCGATGATCTATGGTACACAAAGAGACTTTCAAGCCATGGTGATGAAAATGTTGATGAACTAATGATGAACGGACAAGTGAGAAATGTGTTTGTTGACCCGAGAGATTTTTAG 1197 0.4035 MVDRTKSKVLIREYNEDKDAKMVRKLERNCEGGTKKVVSIFTNMTGDPLSRIRFFPLHVMLVAELLDTRELVGVVRGIIKNMGTLSGSFLKMGCILGLRVSPTYRRKGVALRLVTAAEEWMVRNGAEYAFLATEKNNGASKNLFTIKCNYVNLSSLVIFVQPTSSLTKQISTDIKIEKVDIDLAISLYRRTMRTKDLYPLDMDVILKEKLSLGTWVCYYKEEGWLNLRSKVNNEDLINNNETSRSWVIFSIWNTCEAYKLQVRKSQLLRFLLTTLNHAREKVFPCLKMWVSSSDSLCRPFGFLFIYGIYGEGVNLGELMESMWRFTSRVGEAMRDCRVVITELGFGDPLANHVPQTDSMSCIDDLWYTKRLSSHGDENVDELMMNGQVRNVFVDPRDF* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0308 398 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 211 IPR000182 GO:0016407
Gso9g0308 398 CDD NAT_SF 60 131 - -
Gso9g0308 398 Gene3D - 11 162 - -
Gso9g0308 398 Pfam Acetyltransferase (GNAT) family 61 149 IPR000182 GO:0016407
Gso9g0308 398 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 1 398 - -
Gso9g0308 398 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 144 IPR016181 -
Gso9g0308 398 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0308 Gso-Chr9 2947894 2949598 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso9g0308 Acetyltransf_1 2.8e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0308 - - gmx:100808694 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2028 7 44293755 44295625 Gso9g0308 9 2947894 2949598 PCT
Gso17g0270 17 2443407 2445353 Gso9g0308 9 2947894 2949598 PCT
Gso9g0308 9 2947894 2949598 Gso7g2028 7 44293755 44295625 PCT
Gso9g0308 9 2947894 2949598 Gso17g0270 17 2443407 2445353 PCT