Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0300 ATGGCTTCTCCTCGTTCTTGGTTGTCTTTTCATGTCTCATCATTCATAGTGACAATTCTCATTTTTTGCTTGTCACATTGTGCTCTTTGCCTTGATGGACAAACCGTTGTAGACTCTCCTTTGTTAACAGAAAAATTAGGAATCAATCGCACCATCAAAGTAGATATCAATGGCAATGGAGAGTTCAAATCTATCCAAGCTGCCATAGATTCCATTCCTGAAGGAAATTCTAAATGGGTCATCGTCCATGTTAGAAAAGGAATATACAGAGAAAAGGTGCACGTACCACAAAATAAGCCTTATATATTCATGAGAGGGAATGGGAGAGGAAAAACTGCCATAGTTTGGTCTCAGAGCTCTGAAGATAACATAGATTCTGCCACCTTCAAAGTCGAAGCACACGACTTCATTGCCTTTGGAATTAGCTTCAAGAATGAGGCACCTACGGGGATTGCATATACCTCGCAAAACCAATCAGTGGCAGCATTTGTGGCAGCAGACAAAGTGGCATTTTATCATTGCGCATTTTACAGTACTCATAATACTCTTTTCGATTACAAAGGTAGACATTACTATGAAAGTTGCTACATTCAAGGCTCAATTGATTTCATATTTGGCCGTGGCAGATCGATCTTCCATAAAGCGGATATATTTGTGGTGGATGACAAAAGGGTAACGATTAAAGGTTCAGTCACAGCTCAAAATAGGGAAAGTGAAGGTGAGATGAGCGGGTTTATCTTCATCAAAGGAAAGGTTTATGGCATTGGAGGGGTGTACCTAGGAAGAGCAAAGGGTCCTTATTCTAGGGTGATTTTTGCTGAGACGTATCTATCTAAGACCATTGTCCCAGAAGGGTGGACCAATTGGAGCTATGATGGTAGCACAAAAGATCTATACCATGCGGAGTACGAATGCCATGGACCTGGAGCTTTAACAACGGGACGTGCTCCTTGGTCTAGGCAGCTAACTAAGGAAGAAGTTGCTCCTTTCATATCAATAGATTACATAGATGGCAAGAATTGGTTGCCAGCGTGGGTATAA 1041 0.415 MASPRSWLSFHVSSFIVTILIFCLSHCALCLDGQTVVDSPLLTEKLGINRTIKVDINGNGEFKSIQAAIDSIPEGNSKWVIVHVRKGIYREKVHVPQNKPYIFMRGNGRGKTAIVWSQSSEDNIDSATFKVEAHDFIAFGISFKNEAPTGIAYTSQNQSVAAFVAADKVAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRSIFHKADIFVVDDKRVTIKGSVTAQNRESEGEMSGFIFIKGKVYGIGGVYLGRAKGPYSRVIFAETYLSKTIVPEGWTNWSYDGSTKDLYHAEYECHGPGALTTGRAPWSRQLTKEEVAPFISIDYIDGKNWLPAWV* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0300 346 PANTHER PECTINESTERASE 67-RELATED 10 345 - -
Gso9g0300 346 Gene3D - 46 345 IPR012334 -
Gso9g0300 346 SUPERFAMILY Pectin lyase-like 48 344 IPR011050 -
Gso9g0300 346 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 10 345 - -
Gso9g0300 346 ProSitePatterns Pectinesterase signature 2. 197 206 IPR033131 -
Gso9g0300 346 Pfam Pectinesterase 53 338 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0300 Gso-Chr9 2883075 2884960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0300 15 342 Carbohydrate Esterase AT5G47500 36.467 4.85e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0300 - - gmx:100792967 711.449