Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0298 ATGTTCCATGCATTGATGAGCCTTATCGCGCGCTGTTGGAAGCCGTTCGGGCACGGTGACGACGCCGCTAATGCCGCCGCCGCCGCCGGAAGAGAATGCAAGGACGGCCTCCTCTGGTTCCGCGACATCGGAAAGTTTGCCGCCGGCGATTTCTCCATGGCCGTCGTCCAGGCCAACCAGGTCCTCGAGGACCAGAGCCAGATCGAGTCCGGCGCCTTCGGCTCCTTCGTCGGCGTCTACGACGGCCACGGCGGCCCCGATTGCTCCCGCTATGTCTGCGACAACTTGTTCCGCAATCTCCAAGCGATATTGGCTGAGTCACAGAGTGTTGTGACATCTGAGGCCATTCAACAGGCGTTCCGGCGGACTGAGGAGGGGTTCACGGCGCTTGTTTCGGAGCTGTGGAGCTCCCGGCCGCAGATTGCGACTACTGGGACGTGTTGTTTGGTTGGGGTTATTTGCCGGCAGACGCTCTTTGTGGCGAGTCTTGGAGATTCCCGTGCTGTGTTGGGTAGGAGAGTCGGCAACACCGGTGGGATGGCCGCGATTCAGTTGTCTACGGAGCACAATGCGAATTTTGAGGCTATCAGGCAGGAGCTTAAGGAATTGCACCCGAATGACCCCCAGATTGTTGTCCTCAAACATGGAGTGTGGAGAGTAAAGGGAATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACATGCGCAGTTTAACCGCGAACCCATTAATGCAAAATTCAGACTCCCCGAACCAATGGACATGCCTTTCTTGTCTGCTAATCCAACTATTCTTTCTCATACTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTGAGTAATGATCAAGCAGTGGATATTGTTCACAGCAGTCCACGCGCGGGTAGTGCCAAGAGACTTGTCAAGGCTGCCCTACACGAAGCAGCAAGAAAGCGTGAAATGCGATATTCAGACCTTTACAAGATTGACAAGAAGGTTCGTCGCCATTTTCACGACGATATAACTGTTATTGTTTTATTCTTAAACCACGACCTTATATCCAGAGGCGCAGTTCTAAATACGCCACTCACAATTCGAAGTGCTCTCGATCACTGA 1125 0.5218 MFHALMSLIARCWKPFGHGDDAANAAAAAGRECKDGLLWFRDIGKFAAGDFSMAVVQANQVLEDQSQIESGAFGSFVGVYDGHGGPDCSRYVCDNLFRNLQAILAESQSVVTSEAIQQAFRRTEEGFTALVSELWSSRPQIATTGTCCLVGVICRQTLFVASLGDSRAVLGRRVGNTGGMAAIQLSTEHNANFEAIRQELKELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINAKFRLPEPMDMPFLSANPTILSHTLQPNDSFLIFASDGLWEHLSNDQAVDIVHSSPRAGSAKRLVKAALHEAARKREMRYSDLYKIDKKVRRHFHDDITVIVLFLNHDLISRGAVLNTPLTIRSALDH* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0298 374 PANTHER ALPHABET, ISOFORM E-RELATED 3 374 - -
Gso9g0298 374 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Gso9g0298 374 ProSiteProfiles PPM-type phosphatase domain profile. 50 351 IPR001932 -
Gso9g0298 374 SUPERFAMILY PP2C-like 60 352 IPR036457 -
Gso9g0298 374 CDD PP2Cc 51 351 IPR001932 -
Gso9g0298 374 Gene3D - 44 359 IPR036457 -
Gso9g0298 374 SMART PP2C_4 44 349 IPR001932 -
Gso9g0298 374 Pfam Protein phosphatase 2C 75 321 IPR001932 -
Gso9g0298 374 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0298 Gso-Chr9 2865519 2871163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0298 1 371 PP2C-type Phosphatase Gene Family AT4G38520 58.947 1.64e-158 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0298 K01102 - gmx:100814799 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1167 15 11436631 11442743 Gso9g0298 9 2865519 2871163 GST
Gso7g2017 7 44208921 44213608 Gso9g0298 9 2865519 2871163 PCT
Gso17g0283 17 2522971 2527386 Gso9g0298 9 2865519 2871163 PCT
Gso9g0298 9 2865519 2871163 Gso7g2017 7 44208921 44213608 PCT
Gso9g0298 9 2865519 2871163 Gso17g0283 17 2522971 2527386 PCT